CCU002_02 Liver disease
CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow
PH1014 / 2192 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromePhenotype UUIDBrPVWajNb5rWWVgcLJAKVoSexBothValid Event Date Range08/12/2020 - 18/03/2021Coding SystemICD10 codesSNOMED CT codesNon-standard codesCollectionsBHF Data Science CentrePhenotype LibraryTagsNo dataDefinition
Code type is set to 1 for incident events, and 0 for prevalent events.
Implementation
Implementation
Clinical Code List
PUBLISHED - 10 Codes
PUBLISHED - 180 Codes
PUBLISHED - 141 Codes
Publication
Association of COVID-19 vaccines ChAdOx1 and BNT162b2 with major venous, arterial, and thrombocytopenic events: whole population cohort study in 46 million adults in England CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow medRxiv 2021.08.18.21262222; doi: https://doi.org/10.1
Citation Example
CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow. PH1014 / 2192 - CCU002_02 Liver disease. Phenotype Library [Online]. 17 May 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH1014/version/2192/detail/. [Accessed 08 September 2024]
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH1014/version/2192/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH1014',
version_id=2192
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH1014',
version_id=2192
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH1014/version/2192/export/codes/?format=json CSV site_root/phenotypes/PH1014/version/2192/export/codes/ R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH1014',
version_id=2192
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH1014',
version_id=2192
)Version History