[
  {
    "phenotype_id": "PH1061",
    "phenotype_version_id": 2325,
    "name": "Moderate or severe liver disease - Charlson primary care",
    "definition": "Moderate or severe liver disease comorbidity category for Charlson index, defined in Read codes for primary care by David Metcalfe et. al. The Charlson comorbidity index score for this phenotype is 3.",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1186/s12874-019-0753-5",
        "details": "Metcalfe, D., Masters, J., Delmestri, A. et al. Coding algorithms for defining Charlson and Elixhauser co-morbidities in Read-coded databases. BMC Med Res Methodol 19, 115 (2019). https://doi.org/10.1186/s12874-019-0753-5"
      },
      {
        "doi": null,
        "details": "Charlson ME, Pompei P, Ales KL, et al. A new method of classifying prognostic comorbidity in longitudinal studies: development and validation. J Chronic Dis. 1987;40(5):373–83."
      },
      {
        "doi": "10.1136/bmjopen-2020-047101",
        "details": "Lyons J, Akbari A, Agrawal U, et al Protocol for the development of the Wales Multimorbidity e-Cohort (WMC): data sources and methods to construct a population-based research platform to investigate multimorbidity BMJ Open 2021;11:e047101. doi: 10.1136/bmjopen-2020-047101"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2023-02-13T16:28:08.128643Z",
    "author": "David Metcalfe, James Masters, Antonella Delmestri, Andrew Judge, Daniel Perry, Cheryl Zogg, Belinda Gabbe, Matthew Costa",
    "collections": [
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": [
      {
        "name": "Comorbidity Index",
        "value": 29
      }
    ],
    "organisation": null,
    "world_access": 1,
    "updated": "2023-02-13T16:28:08.128663Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": null,
    "coding_system": [
      {
        "name": "Read codes v2",
        "value": 5
      }
    ],
    "event_date_range": "",
    "concept_information": [
      {
        "concept_id": 3329,
        "concept_version_id": 10195,
        "concept_name": "Moderate or severe liver disease Read codes - Charlson",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH1061",
        "phenotype_version_id": 2325,
        "phenotype_name": "Moderate or severe liver disease - Charlson primary care",
        "code_attribute_header": [
          "Medcode"
        ],
        "codes": [
          {
            "code": "5719PH",
            "description": "PORTAL HYPERTENSION",
            "attributes": {
              "Medcode": "306684"
            }
          },
          {
            "code": "573 B",
            "description": "HEPATIC COMA",
            "attributes": {
              "Medcode": "202263"
            }
          },
          {
            "code": "573 HR",
            "description": "SYNDROME HEPATORENAL",
            "attributes": {
              "Medcode": "211271"
            }
          },
          {
            "code": "7609.00",
            "description": "Open operations on oesophageal varices",
            "attributes": {
              "Medcode": "24220"
            }
          },
          {
            "code": "7609300",
            "description": "Local ligation of oesophageal varices",
            "attributes": {
              "Medcode": "43404"
            }
          },
          {
            "code": "7609400",
            "description": "Open injection sclerotherapy to oesophageal varices",
            "attributes": {
              "Medcode": "20912"
            }
          },
          {
            "code": "7609y00",
            "description": "Other specified open operation on oesophageal varices",
            "attributes": {
              "Medcode": "107975"
            }
          },
          {
            "code": "7609z00",
            "description": "Open operation on oesophageal varices NOS",
            "attributes": {
              "Medcode": "20233"
            }
          },
          {
            "code": "760C300",
            "description": "Fibreoptic endoscopic injection sclerotherapy oesoph varices",
            "attributes": {
              "Medcode": "11960"
            }
          },
          {
            "code": "760C500",
            "description": "Fibreoptic endoscopic banding of oesophageal varices",
            "attributes": {
              "Medcode": "16759"
            }
          },
          {
            "code": "760F300",
            "description": "Rigid oesophagoscopic injection sclerotherapy oesoph varices",
            "attributes": {
              "Medcode": "47214"
            }
          },
          {
            "code": "760F400",
            "description": "Rigid oesophagoscopic banding of oesophageal varices",
            "attributes": {
              "Medcode": "46647"
            }
          },
          {
            "code": "A700.00",
            "description": "Viral hepatitis A with coma",
            "attributes": {
              "Medcode": "55962"
            }
          },
          {
            "code": "A702.00",
            "description": "Viral hepatitis B with coma",
            "attributes": {
              "Medcode": "69053"
            }
          },
          {
            "code": "A704.00",
            "description": "Other specified viral hepatitis with coma",
            "attributes": {
              "Medcode": "69552"
            }
          },
          {
            "code": "A704000",
            "description": "Viral hepatitis C with coma",
            "attributes": {
              "Medcode": "65050"
            }
          },
          {
            "code": "A704z00",
            "description": "Other specified viral hepatitis with hepatic coma NOS",
            "attributes": {
              "Medcode": "89587"
            }
          },
          {
            "code": "G850.00",
            "description": "Oesophageal varices with bleeding",
            "attributes": {
              "Medcode": "24989"
            }
          },
          {
            "code": "G851.00",
            "description": "Oesophageal varices without bleeding",
            "attributes": {
              "Medcode": "30655"
            }
          },
          {
            "code": "G85..11",
            "description": "Oesophageal varices",
            "attributes": {
              "Medcode": "1641"
            }
          },
          {
            "code": "G852.00",
            "description": "Oesophageal varices in diseases EC",
            "attributes": {
              "Medcode": "44424"
            }
          },
          {
            "code": "G852000",
            "description": "Oesophageal varices with bleeding in diseases EC",
            "attributes": {
              "Medcode": "96756"
            }
          },
          {
            "code": "G852100",
            "description": "Oesophageal varices without bleeding in diseases EC",
            "attributes": {
              "Medcode": "73139"
            }
          },
          {
            "code": "G852200",
            "description": "Oesophageal varices in cirrhosis of the liver",
            "attributes": {
              "Medcode": "26319"
            }
          },
          {
            "code": "G852300",
            "description": "Oesophageal varices in alcoholic cirrhosis of the liver",
            "attributes": {
              "Medcode": "8363"
            }
          },
          {
            "code": "G852z00",
            "description": "Oesophageal varices in diseases EC NOS",
            "attributes": {
              "Medcode": "62582"
            }
          },
          {
            "code": "G858.00",
            "description": "Oesophageal varices NOS",
            "attributes": {
              "Medcode": "10797"
            }
          },
          {
            "code": "Gyu9400",
            "description": "[X]Oesophageal varices in diseases classified elsewhere",
            "attributes": {
              "Medcode": "105611"
            }
          },
          {
            "code": "J622.00",
            "description": "Hepatic coma",
            "attributes": {
              "Medcode": "23511"
            }
          },
          {
            "code": "J622.11",
            "description": "Encephalopathy - hepatic",
            "attributes": {
              "Medcode": "22411"
            }
          },
          {
            "code": "J623.00",
            "description": "Portal hypertension",
            "attributes": {
              "Medcode": "5129"
            }
          },
          {
            "code": "J624.00",
            "description": "Hepatorenal syndrome",
            "attributes": {
              "Medcode": "10636"
            }
          },
          {
            "code": "J62y.00",
            "description": "Other sequelae of chronic liver disease",
            "attributes": {
              "Medcode": "216331"
            }
          },
          {
            "code": "J62z.00",
            "description": "Liver abscess and chronic liver disease causing sequelae NOS",
            "attributes": {
              "Medcode": "225440"
            }
          },
          {
            "code": "SP14300",
            "description": "Hepatorenal syndrome as a complication of care",
            "attributes": {
              "Medcode": "10721"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/hd26-zp37",
    "is_deleted": false,
    "publish_status": 2,
    "owner": "coldeaa",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 2325,
        "version_name": "Moderate or severe liver disease - Charlson primary care",
        "version_date": "2023-02-13T16:28:08.148471Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]