[
  {
    "phenotype_id": "PH144",
    "phenotype_version_id": 288,
    "name": "Crohn's disease",
    "definition": "At the specified date, a patient is defined as having had 'Crohn's disease' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Crohn's disease' diagnosis or history of diagnosis or procedure during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of 'Crohn's disease' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:04:55.306668Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:04:55.306695Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1096,
        "concept_version_id": 3331,
        "concept_name": "Crohn's disease - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH144",
        "phenotype_version_id": 288,
        "phenotype_name": "Crohn's disease",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "J08z900",
            "description": "Orofacial Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "29616.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J40..00",
            "description": "Regional enteritis - Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "11286.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400.00",
            "description": "Regional enteritis of the small bowel",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "51576.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400000",
            "description": "Regional enteritis of the duodenum",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "71945.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400100",
            "description": "Regional enteritis of the jejunum",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "63036.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400200",
            "description": "Crohn's disease of the terminal ileum",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "28476.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400300",
            "description": "Crohn's disease of the ileum unspecified",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "66238.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400400",
            "description": "Crohn's disease of the ileum NOS",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "39278.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400500",
            "description": "Exacerbation of Crohn's disease of small intestine",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "36913.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J400z00",
            "description": "Crohn's disease of the small bowel NOS",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "9359.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401.00",
            "description": "Regional enteritis of the large bowel",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "44426.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401000",
            "description": "Regional enteritis of the colon",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "62628.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J40..11",
            "description": "Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "593.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401100",
            "description": "Regional enteritis of the rectum",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "64773.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J40..12",
            "description": "Granulomatous enteritis",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "51578.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401200",
            "description": "Exacerbation of Crohn's disease of large intestine",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "39037.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401z00",
            "description": "Crohn's disease of the large bowel NOS",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "20688.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J401z11",
            "description": "Crohn's colitis",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "6538.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J402.00",
            "description": "Regional ileocolitis",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "15773.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J40z.00",
            "description": "Regional enteritis NOS",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "52449.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "J40z.11",
            "description": "Crohn's disease NOS",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "59994.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "Jyu4000",
            "description": "[X]Other Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "69959.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "N031100",
            "description": "Arthropathy in Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "20480.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "N045300",
            "description": "Juvenile arthritis in Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "12575.0",
              "Category": "History of Crohn's disease"
            }
          },
          {
            "code": "ZR3S.00",
            "description": "Crohn's disease activity index",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "11337.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          },
          {
            "code": "ZR3S.11",
            "description": "CDAI - Crohn's disease activity index",
            "attributes": {
              "Disease": "Crohn's disease",
              "Medcode": "11119.0",
              "Category": "Diagnosis of Crohn's disease"
            }
          }
        ]
      },
      {
        "concept_id": 1097,
        "concept_version_id": 3333,
        "concept_name": "Crohn's disease - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH144",
        "phenotype_version_id": 288,
        "phenotype_name": "Crohn's disease",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "11119.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "CDAI - Crohn's disease activity index",
              "Readcode": "ZR3S.11"
            }
          },
          {
            "code": "11286.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis - Crohn's disease",
              "Readcode": "J40..00"
            }
          },
          {
            "code": "11337.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease activity index",
              "Readcode": "ZR3S.00"
            }
          },
          {
            "code": "12575.0",
            "description": "History of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Juvenile arthritis in Crohn's disease",
              "Readcode": "N045300"
            }
          },
          {
            "code": "15773.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional ileocolitis",
              "Readcode": "J402.00"
            }
          },
          {
            "code": "20480.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Arthropathy in Crohn's disease",
              "Readcode": "N031100"
            }
          },
          {
            "code": "20688.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease of the large bowel NOS",
              "Readcode": "J401z00"
            }
          },
          {
            "code": "28476.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease of the terminal ileum",
              "Readcode": "J400200"
            }
          },
          {
            "code": "29616.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Orofacial Crohn's disease",
              "Readcode": "J08z900"
            }
          },
          {
            "code": "36913.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Exacerbation of Crohn's disease of small intestine",
              "Readcode": "J400500"
            }
          },
          {
            "code": "39037.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Exacerbation of Crohn's disease of large intestine",
              "Readcode": "J401200"
            }
          },
          {
            "code": "39278.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease of the ileum NOS",
              "Readcode": "J400400"
            }
          },
          {
            "code": "44426.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the large bowel",
              "Readcode": "J401.00"
            }
          },
          {
            "code": "51576.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the small bowel",
              "Readcode": "J400.00"
            }
          },
          {
            "code": "51578.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Granulomatous enteritis",
              "Readcode": "J40..12"
            }
          },
          {
            "code": "52449.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis NOS",
              "Readcode": "J40z.00"
            }
          },
          {
            "code": "593.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease",
              "Readcode": "J40..11"
            }
          },
          {
            "code": "59994.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease NOS",
              "Readcode": "J40z.11"
            }
          },
          {
            "code": "62628.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the colon",
              "Readcode": "J401000"
            }
          },
          {
            "code": "63036.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the jejunum",
              "Readcode": "J400100"
            }
          },
          {
            "code": "64773.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the rectum",
              "Readcode": "J401100"
            }
          },
          {
            "code": "6538.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's colitis",
              "Readcode": "J401z11"
            }
          },
          {
            "code": "66238.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease of the ileum unspecified",
              "Readcode": "J400300"
            }
          },
          {
            "code": "69959.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "[X]Other Crohn's disease",
              "Readcode": "Jyu4000"
            }
          },
          {
            "code": "71945.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Regional enteritis of the duodenum",
              "Readcode": "J400000"
            }
          },
          {
            "code": "9359.0",
            "description": "Diagnosis of Crohn's disease",
            "attributes": {
              "Disease": "Crohn's disease",
              "ReadcodeDescr": "Crohn's disease of the small bowel NOS",
              "Readcode": "J400z00"
            }
          }
        ]
      },
      {
        "concept_id": 1098,
        "concept_version_id": 3335,
        "concept_name": "Crohn's disease - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH144",
        "phenotype_version_id": 288,
        "phenotype_name": "Crohn's disease",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "K50",
            "description": "Crohn's disease [regional enteritis]",
            "attributes": {
              "Disease": "Crohn's disease",
              "Category": "Diagnosis of Crohn's disease"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/pjj6-ab77",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 288,
        "version_name": "Crohn's disease",
        "version_date": "2021-10-06T16:04:55.333093Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]