[
  {
    "phenotype_id": "PH160",
    "phenotype_version_id": 320,
    "name": "Encephalitis",
    "definition": "At the specified date, a patient is defined as having had 'Encephalitis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nSecondary care\n\n\n1. ALL diagnoses of 'Encephalitis' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:05:41.252088Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:05:41.252116Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Encephalitis---f8d002a0-177c-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Encephalitis.cwl",
    "data_sources": [
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1141,
        "concept_version_id": 3421,
        "concept_name": "Encephalitis - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH160",
        "phenotype_version_id": 320,
        "phenotype_name": "Encephalitis",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "A83",
            "description": "Mosquito-borne viral encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "A84",
            "description": "Tick-borne viral encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "A85",
            "description": "Other viral encephalitis, not elsewhere classified",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "A86",
            "description": "Unspecified viral encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B00.4",
            "description": "Herpesviral encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B01.1",
            "description": "Varicella encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B02.0",
            "description": "Zoster encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B05.0",
            "description": "Measles complicated by encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B26.2",
            "description": "Mumps encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          },
          {
            "code": "B94.1",
            "description": "Sequelae of viral encephalitis",
            "attributes": {
              "Disease": "Encephalitis",
              "Category": "Diagnosis of Encephalitis"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/q87e-8k93",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 320,
        "version_name": "Encephalitis",
        "version_date": "2021-10-06T16:05:41.275092Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]