[ { "phenotype_id": "PH1718", "phenotype_version_id": 3648, "name": "Schizophrenia", "definition": "Codelists for schizophrenia.\n\nICD-10 codes ---\n\nAs per previous studies from the authors; for example, see: JacksonCA, Kerssens J,\nFleetwood K, Smith DJ, Mercer SW, Wild SH. Incidence of ischaemicheart disease and\nstroke among people with psychiatric disorders: retrospective cohortstudy. The British\nJournal of Psychiatry. 2020;217(2):442-449. doi:10.1192/bjp.2019.250.\n\nSNOMED codes ---\n\nPlease note: this codelist was developed for use with the GeneralPractice Extraction\nService Data for Pandemic Planning and Research (GDPPR) dataset.The GDPPR dataset\nonly includes a subset of all SNOMED codes, hence this codelistmay not be appropriate\nfor use with other datasets. The codes in this codelist comefrom version 47.1 of\nthe QOF cluster list. If you are re-using this codelist with the GDPPR dataset, pleasenote\nthat the QOF cluster list is regularly updated. We recommend that you reviewthis\ncodelist with respect to the latest version of the QOF cluster list.\n\nTo develop our SNOMED codelists for mental illness (including schizophrenia) we extractedcodes\nfrom all of the clusters related to relevant mental illness diagnoses: DEPR_COD(depression\ndiagnosis codes), DEPRES_COD (depression resolved codes) and MH_COD (psychosisand\nschizophrenia and bipolar affective disease codes) from version 47.1 of the QOFcluster\nlist (which was the most recent version at the time of developing the SMIcodelists).\nAdditionally, we mapped existing Read v2 and Clinical Terms Version 3codelists (Prigge\nR, Fleetwood KJ, Jackson CA, et al. Robustly Measuring MultipleLong-Term Health Conditions\nUsing Disparate Linked Datasets in UK Biobank. Availableat SSRN: [https://ssrn.com/abstract=4863974](https://ssrn.com/abstract=4863974).) for schizophrenia, bipolar disorder and depression to SNOMED, and identified codes available within the GDPPR dataset. We collated all SNOMED codes identified from the clusters, and from the mapping process and then identified codes for each of schizophrenia, bipolar disorder or depression.\n", "implementation": "", "publications": [], "validation": "", "citation_requirements": "", "created": "2025-02-27T09:49:03.297731Z", "author": "Kelly Fleetwood, John Nolan, Daniel J Smith, Caroline A Jackson", "collections": [ { "name": "BHF Data Science Centre", "value": 20 } ], "tags": null, "organisation": { "id": 13, "slug": "bhf-data-science-centre", "name": "BHF Data Science Centre" }, "world_access": 2, "updated": "2025-02-27T10:39:47.013106Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "trials": null, "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "GPES Data for Pandemic Planning and Research (COVID-19)", "value": 1, "uid": "c7eed372-9f1e-467e-8a37-948f4de5abc4", "url": "https://healthdatagateway.org/en/dataset/874", "datasource_id": 874 }, { "name": "Hospital Episode Statistics Admitted Patient Care", "value": 2, "uid": "6599230a-df54-4615-937c-d724d239491f", "url": "https://healthdatagateway.org/en/dataset/875", "datasource_id": 875 } ], "endorsements": null, "project_name": "CCU046", "coding_system": [ { "name": "SNOMED CT codes", "value": 9 }, { "name": "ICD10 codes", "value": 4 } ], "corresp_author": null, "event_date_range": "", "concept_information": [ { "concept_id": 4191, "concept_version_id": 11551, "concept_name": "Schizophrenia", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH1718", "phenotype_version_id": 3648, "phenotype_name": "Schizophrenia", "code_attribute_header": null, "codes": [ { "code": "F20", "description": "Schizophrenia", "attributes": null }, { "code": "F25", "description": "Schizoaffective disorders", "attributes": null } ] }, { "concept_id": 4192, "concept_version_id": 11552, "concept_name": "Schizophrenia", "coding_system": { "id": 9, "name": "SNOMED CT codes", "description": "SNOMED CT codes" }, "phenotype_id": "PH1718", "phenotype_version_id": 3648, "phenotype_name": "Schizophrenia", "code_attribute_header": null, "codes": [ { "code": "1089481000000106", "description": "Cataleptic schizophrenia (disorder)", "attributes": null }, { "code": "111482003", "description": "Subchronic schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "111483008", "description": "Catatonic schizophrenia in remission (disorder)", "attributes": null }, { "code": "111484002", "description": "Undifferentiated schizophrenia (disorder)", "attributes": null }, { "code": "12939007", "description": "Chronic disorganized schizophrenia (disorder)", "attributes": null }, { "code": "14291003", "description": "Subchronic disorganized schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "16990005", "description": "Subchronic schizophrenia (disorder)", "attributes": null }, { "code": "191526005", "description": "Schizophrenic disorders (disorder)", "attributes": null }, { "code": "191527001", "description": "Simple schizophrenia (disorder)", "attributes": null }, { "code": "191530008", "description": "Acute exacerbation of subchronic schizophrenia (disorder)", "attributes": null }, { "code": "191531007", "description": "Acute exacerbation of chronic schizophrenia (disorder)", "attributes": null }, { "code": "191538001", "description": "Acute exacerbation of subchronic hebephrenic schizophrenia (disorder)", "attributes": null }, { "code": "191539009", "description": "Acute exacerbation of chronic hebephrenic schizophrenia (disorder)", "attributes": null }, { "code": "191542003", "description": "Catatonic schizophrenia (disorder)", "attributes": null }, { "code": "191547009", "description": "Acute exacerbation of subchronic catatonic schizophrenia (disorder)", "attributes": null }, { "code": "191548004", "description": "Acute exacerbation of chronic catatonic schizophrenia (disorder)", "attributes": null }, { "code": "191554003", "description": "Acute exacerbation of subchronic paranoid schizophrenia (disorder)", "attributes": null }, { "code": "191555002", "description": "Acute exacerbation of chronic paranoid schizophrenia (disorder)", "attributes": null }, { "code": "191559008", "description": "Latent schizophrenia (disorder)", "attributes": null }, { "code": "191561004", "description": "Subchronic latent schizophrenia (disorder)", "attributes": null }, { "code": "191562006", "description": "Chronic latent schizophrenia (disorder)", "attributes": null }, { "code": "191563001", "description": "Acute exacerbation of subchronic latent schizophrenia (disorder)", "attributes": null }, { "code": "191564007", "description": "Acute exacerbation of chronic latent schizophrenia (disorder)", "attributes": null }, { "code": "191565008", "description": "Latent schizophrenia in remission (disorder)", "attributes": null }, { "code": "191567000", "description": "Schizoaffective schizophrenia (disorder)", "attributes": null }, { "code": "191569002", "description": "Subchronic schizoaffective schizophrenia (disorder)", "attributes": null }, { "code": "191570001", "description": "Chronic schizoaffective schizophrenia (disorder)", "attributes": null }, { "code": "191571002", "description": "Acute exacerbation of subchronic schizoaffective schizophrenia (disorder)", "attributes": null }, { "code": "191572009", "description": "Acute exacerbation of chronic schizoaffective schizophrenia (disorder)", "attributes": null }, { "code": "191574005", "description": "Schizoaffective schizophrenia in remission (disorder)", "attributes": null }, { "code": "191577003", "description": "Cenesthopathic schizophrenia (disorder)", "attributes": null }, { "code": "231485007", "description": "Post-schizophrenic depression (disorder)", "attributes": null }, { "code": "26025008", "description": "Residual schizophrenia (disorder)", "attributes": null }, { "code": "268617001", "description": "Acute schizophrenic episode (disorder)", "attributes": null }, { "code": "270901009", "description": "Schizoaffective disorder, mixed type (disorder)", "attributes": null }, { "code": "271428004", "description": "Schizoaffective disorder, manic type (disorder)", "attributes": null }, { "code": "27387000", "description": "Subchronic disorganized schizophrenia (disorder)", "attributes": null }, { "code": "29599000", "description": "Chronic undifferentiated schizophrenia (disorder)", "attributes": null }, { "code": "30336007", "description": "Chronic residual schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "31373002", "description": "Disorganized schizophrenia in remission (disorder)", "attributes": null }, { "code": "31658008", "description": "Chronic paranoid schizophrenia (disorder)", "attributes": null }, { "code": "35218008", "description": "Chronic disorganized schizophrenia with acute exacerbation (disorder)", "attributes": null }, { "code": "35252006", "description": "Disorganized schizophrenia (disorder)", "attributes": null }, { "code": "38368003", "description": "Schizoaffective disorder, bipolar type (disorder)", "attributes": null }, { "code": "39610001", "description": "Undifferentiated schizophrenia in remission (disorder)", "attributes": null }, { "code": "416340002", "description": "Late onset schizophrenia (disorder)", "attributes": null }, { "code": "42868002", "description": "Subchronic catatonic schizophrenia (disorder)", "attributes": null }, { "code": "4926007", "description": "Schizophrenia in remission (disorder)", "attributes": null }, { "code": "51133006", "description": "Residual schizophrenia in remission (disorder)", "attributes": null }, { "code": "58214004", "description": "Schizophrenia (disorder)", "attributes": null }, { "code": "63181006", "description": "Paranoid schizophrenia in remission (disorder)", "attributes": null }, { "code": "64905009", "description": "Paranoid schizophrenia (disorder)", "attributes": null }, { "code": "68890003", "description": "Schizoaffective disorder (disorder)", "attributes": null }, { "code": "68995007", "description": "Chronic catatonic schizophrenia (disorder)", "attributes": null }, { "code": "7025000", "description": "Subchronic undifferentiated schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "70814008", "description": "Subchronic residual schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "71103003", "description": "Chronic residual schizophrenia (disorder)", "attributes": null }, { "code": "76566000", "description": "Subchronic residual schizophrenia (disorder)", "attributes": null }, { "code": "79204003", "description": "Chronic undifferentiated schizophrenia with acute exacerbations (disorder)", "attributes": null }, { "code": "79866005", "description": "Subchronic paranoid schizophrenia (disorder)", "attributes": null }, { "code": "83746006", "description": "Chronic schizophrenia (disorder)", "attributes": null }, { "code": "84760002", "description": "Schizoaffective disorder, depressive type (disorder)", "attributes": null }, { "code": "85861002", "description": "Subchronic undifferentiated schizophrenia (disorder)", "attributes": null }, { "code": "88975006", "description": "Schizophreniform disorder (disorder)", "attributes": null } ] } ], "status": 1, "doi": "https://doi.org/10.48533/t474-2t30", "is_deleted": false, "publish_status": 2, "owner": "kelly.fleetwood", "template": { "id": 2, "name": "BHF Data Science Centre Phenotype", "description": "BHF Data Science Centre Phenotype definitions that describe a list of clinical codes, algorithms using clinical codes, or set of clinical trials. Visit the BHF Data Science Centre website to learn more: https://bhfdatasciencecentre.org", "version_id": 1 }, "versions": [ { "version_id": 3648, "version_name": "Schizophrenia", "version_date": "2025-02-27T10:39:47.043696Z", "is_published": true, "is_latest": true }, { "version_id": 3643, "version_name": "Schizophrenia", "version_date": "2025-02-27T09:49:03.313714Z", "is_published": true, "is_latest": false } ] } ]