[
  {
    "phenotype_id": "PH196",
    "phenotype_version_id": 392,
    "name": "Juvenile arthritis",
    "definition": "At the specified date, a patient is defined as having had 'Juvenile arthritis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Juvenile arthritis' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of 'Juvenile arthritis' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:07:25.538345Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:07:25.538373Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Juvenile-arthritis---24b8d5b0-178f-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Juvenile-arthritis.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1249,
        "concept_version_id": 3637,
        "concept_name": "Juvenile arthritis - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH196",
        "phenotype_version_id": 392,
        "phenotype_name": "Juvenile arthritis",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "N043.00",
            "description": "Juvenile rheumatoid arthritis - Still's disease",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "4186.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N043000",
            "description": "Juvenile rheumatoid arthropathy unspecified",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "50644.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N043100",
            "description": "Acute polyarticular juvenile rheumatoid arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "47831.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N043200",
            "description": "Pauciarticular juvenile rheumatoid arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "21533.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N043300",
            "description": "Monarticular juvenile rheumatoid arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "36276.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N043z00",
            "description": "Juvenile rheumatoid arthritis NOS",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "27557.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045.00",
            "description": "Other juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "7196.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045000",
            "description": "Juvenile ankylosing spondylitis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "42405.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045100",
            "description": "Juvenile seronegative polyarthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "31181.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045200",
            "description": "Juvenile arthritis in psoriasis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "28456.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045300",
            "description": "Juvenile arthritis in Crohn's disease",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "12575.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045400",
            "description": "Juvenile arthritis in ulcerative colitis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "71083.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045500",
            "description": "Juvenile rheumatoid arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "31360.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "N045600",
            "description": "Pauciarticular onset juvenile chronic arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "46622.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "Nyu1500",
            "description": "[X]Other juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Medcode": "94854.0",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          }
        ]
      },
      {
        "concept_id": 1250,
        "concept_version_id": 3639,
        "concept_name": "Juvenile arthritis - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH196",
        "phenotype_version_id": 392,
        "phenotype_name": "Juvenile arthritis",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "12575.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile arthritis in Crohn's disease",
              "Readcode": "N045300"
            }
          },
          {
            "code": "21533.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Pauciarticular juvenile rheumatoid arthritis",
              "Readcode": "N043200"
            }
          },
          {
            "code": "27557.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile rheumatoid arthritis NOS",
              "Readcode": "N043z00"
            }
          },
          {
            "code": "28456.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile arthritis in psoriasis",
              "Readcode": "N045200"
            }
          },
          {
            "code": "31181.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile seronegative polyarthritis",
              "Readcode": "N045100"
            }
          },
          {
            "code": "31360.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile rheumatoid arthritis",
              "Readcode": "N045500"
            }
          },
          {
            "code": "36276.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Monarticular juvenile rheumatoid arthritis",
              "Readcode": "N043300"
            }
          },
          {
            "code": "4186.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile rheumatoid arthritis - Still's disease",
              "Readcode": "N043.00"
            }
          },
          {
            "code": "42405.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile ankylosing spondylitis",
              "Readcode": "N045000"
            }
          },
          {
            "code": "46622.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Pauciarticular onset juvenile chronic arthritis",
              "Readcode": "N045600"
            }
          },
          {
            "code": "47831.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Acute polyarticular juvenile rheumatoid arthritis",
              "Readcode": "N043100"
            }
          },
          {
            "code": "50644.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile rheumatoid arthropathy unspecified",
              "Readcode": "N043000"
            }
          },
          {
            "code": "71083.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Juvenile arthritis in ulcerative colitis",
              "Readcode": "N045400"
            }
          },
          {
            "code": "7196.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "Other juvenile arthritis",
              "Readcode": "N045.00"
            }
          },
          {
            "code": "94854.0",
            "description": "Diagnosis of Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "ReadcodeDescr": "[X]Other juvenile arthritis",
              "Readcode": "Nyu1500"
            }
          }
        ]
      },
      {
        "concept_id": 1251,
        "concept_version_id": 3641,
        "concept_name": "Juvenile arthritis - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH196",
        "phenotype_version_id": 392,
        "phenotype_name": "Juvenile arthritis",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "M08",
            "description": "Juvenile arthritis",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          },
          {
            "code": "M09",
            "description": "Juvenile arthritis in diseases classified elsewhere",
            "attributes": {
              "Disease": "Juvenile arthritis",
              "Category": "Diagnosis of Juvenile arthritis"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/c7sh-r313",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 392,
        "version_name": "Juvenile arthritis",
        "version_date": "2021-10-06T16:07:25.566676Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]