[
  {
    "phenotype_id": "PH227",
    "phenotype_version_id": 454,
    "name": "Infection of other or unspecified genitourinary system",
    "definition": "At the specified date, a patient is defined as having had 'Infection of other or unspecified genitourinary system' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nSecondary care\n\n\n1. ALL diagnoses of 'Infection of other or unspecified genitourinary system' or history of diagnosis during a hospitalization\nOR\n\n\n2. ALL possible diagnosis of 'Infection of other or unspecified genitourinary system' during a hospitalization IF NO record satisfying criteria for Urinary Tract Infections, Infection of male genital system or Female pelvic inflammatory disease 30 days before or 30 days after the first event date for 'Infection of other or unspecified genitourinary system'.\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:08:36.787325Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:08:36.787351Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Infection-of-other-or-unspecified-genitourinary-system---2c1729e0-179b-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Infection-of-other-or-unspecified-genitourinary-system.cwl",
    "data_sources": [
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1332,
        "concept_version_id": 3803,
        "concept_name": "Infection of other or unspecified genitourinary system - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH227",
        "phenotype_version_id": 454,
        "phenotype_name": "Infection of other or unspecified genitourinary system",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "A18.1",
            "description": "Tuberculosis of genitourinary system",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A51.0",
            "description": "Primary genital syphilis",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A54.0",
            "description": "Gonococcal infection of lower genitourinary tract without periurethral or accessory gland abscess",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A54.1",
            "description": "Gonococcal infection of lower genitourinary tract with periurethral and accessory gland abscess",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A54.2",
            "description": "Gonococcal pelviperitonitis and other gonococcal genitourinary infections",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A56.0",
            "description": "Chlamydial infection of lower genitourinary tract",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A56.1",
            "description": "Chlamydial infection of pelviperitoneum and other genitourinary organs",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A56.2",
            "description": "Chlamydial infection of genitourinary tract, unspecified",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A57",
            "description": "Chancroid",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A58",
            "description": "Granuloma inguinale",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A59.0",
            "description": "Urogenital trichomoniasis",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "A60.0",
            "description": "Herpesviral infection of genitalia and urogenital tract",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "B37.3",
            "description": "Candidiasis of vulva and vagina",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "B37.4",
            "description": "Candidiasis of other urogenital sites",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "B90.1",
            "description": "Sequelae of genitourinary tuberculosis",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Possible diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "N75.1",
            "description": "Abscess of Bartholin's gland",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "N77.0",
            "description": "Ulceration of vulva in infectious and parasitic diseases classified elsewhere",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Diagnosis of Infection of other or unspecified genitourinary system"
            }
          },
          {
            "code": "N77.1",
            "description": "Vaginitis, vulvitis and vulvovaginitis in infectious and parasitic diseases classified elsewhere",
            "attributes": {
              "Disease": "Infection of other or unspecified genitourinary system",
              "Category": "Diagnosis of Infection of other or unspecified genitourinary system"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/anre-xv17",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 454,
        "version_name": "Infection of other or unspecified genitourinary system",
        "version_date": "2021-10-06T16:08:36.807437Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]