[
  {
    "phenotype_id": "PH232",
    "phenotype_version_id": 464,
    "name": "Pancreatitis",
    "definition": "At the specified date, a patient is defined as having had 'Pancreatitis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Pancreatitis' diagnosis or history of diagnosis or procedure during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of 'Pancreatitis' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:08:48.885694Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:08:48.885722Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Pancreatitis---be104170-179f-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Pancreatitis.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1339,
        "concept_version_id": 3817,
        "concept_name": "Pancreatitis - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH232",
        "phenotype_version_id": 464,
        "phenotype_name": "Pancreatitis",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "14CG.00",
            "description": "History of acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "32954.0",
              "Category": "History of Pancreatitis"
            }
          },
          {
            "code": "14CH.00",
            "description": "History of chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "71633.0",
              "Category": "History of Pancreatitis"
            }
          },
          {
            "code": "A723.00",
            "description": "Mumps pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "18544.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "A785100",
            "description": "Cytomegaloviral pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "44278.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "D201612",
            "description": "Pancytopenia with pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "61326.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670.00",
            "description": "Acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "1113.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670000",
            "description": "Acute pancreatitis unspecified",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "49499.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670100",
            "description": "Acute recurrent pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "1506.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670200",
            "description": "Acute haemorrhagic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "31395.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670300",
            "description": "Acute suppurative pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "44571.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670400",
            "description": "Subacute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "48685.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670500",
            "description": "Gallstone acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "12316.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670600",
            "description": "Idiopathic acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "105194.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670700",
            "description": "Biliary acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "104385.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670800",
            "description": "Alcohol-induced acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "104611.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670900",
            "description": "Drug-induced acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "105910.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670y00",
            "description": "Other acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "105066.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670z00",
            "description": "Acute pancreatitis NOS",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "14905.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J670z11",
            "description": "Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "656.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J671.00",
            "description": "Chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "1419.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J671000",
            "description": "Alcohol-induced chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "24984.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J671100",
            "description": "Gallstone chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "42278.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "J672100",
            "description": "Pseudocyst of pancreas",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "4650.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "Jyu8400",
            "description": "[X]Other chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Medcode": "49353.0",
              "Category": "Diagnosis of Pancreatitis"
            }
          }
        ]
      },
      {
        "concept_id": 1340,
        "concept_version_id": 3819,
        "concept_name": "Pancreatitis - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH232",
        "phenotype_version_id": 464,
        "phenotype_name": "Pancreatitis",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "104385.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Biliary acute pancreatitis",
              "Readcode": "J670700"
            }
          },
          {
            "code": "104611.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Alcohol-induced acute pancreatitis",
              "Readcode": "J670800"
            }
          },
          {
            "code": "105066.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Other acute pancreatitis",
              "Readcode": "J670y00"
            }
          },
          {
            "code": "105194.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Idiopathic acute pancreatitis",
              "Readcode": "J670600"
            }
          },
          {
            "code": "105910.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Drug-induced acute pancreatitis",
              "Readcode": "J670900"
            }
          },
          {
            "code": "1113.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute pancreatitis",
              "Readcode": "J670.00"
            }
          },
          {
            "code": "12316.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Gallstone acute pancreatitis",
              "Readcode": "J670500"
            }
          },
          {
            "code": "1419.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Chronic pancreatitis",
              "Readcode": "J671.00"
            }
          },
          {
            "code": "14905.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute pancreatitis NOS",
              "Readcode": "J670z00"
            }
          },
          {
            "code": "1506.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute recurrent pancreatitis",
              "Readcode": "J670100"
            }
          },
          {
            "code": "18544.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Mumps pancreatitis",
              "Readcode": "A723.00"
            }
          },
          {
            "code": "24984.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Alcohol-induced chronic pancreatitis",
              "Readcode": "J671000"
            }
          },
          {
            "code": "31395.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute haemorrhagic pancreatitis",
              "Readcode": "J670200"
            }
          },
          {
            "code": "32954.0",
            "description": "History of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "History of acute pancreatitis",
              "Readcode": "14CG.00"
            }
          },
          {
            "code": "42278.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Gallstone chronic pancreatitis",
              "Readcode": "J671100"
            }
          },
          {
            "code": "44278.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Cytomegaloviral pancreatitis",
              "Readcode": "A785100"
            }
          },
          {
            "code": "44571.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute suppurative pancreatitis",
              "Readcode": "J670300"
            }
          },
          {
            "code": "4650.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Pseudocyst of pancreas",
              "Readcode": "J672100"
            }
          },
          {
            "code": "48685.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Subacute pancreatitis",
              "Readcode": "J670400"
            }
          },
          {
            "code": "49353.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "[X]Other chronic pancreatitis",
              "Readcode": "Jyu8400"
            }
          },
          {
            "code": "49499.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Acute pancreatitis unspecified",
              "Readcode": "J670000"
            }
          },
          {
            "code": "61326.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Pancytopenia with pancreatitis",
              "Readcode": "D201612"
            }
          },
          {
            "code": "656.0",
            "description": "Diagnosis of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "Pancreatitis",
              "Readcode": "J670z11"
            }
          },
          {
            "code": "71633.0",
            "description": "History of Pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "ReadcodeDescr": "History of chronic pancreatitis",
              "Readcode": "14CH.00"
            }
          }
        ]
      },
      {
        "concept_id": 1341,
        "concept_version_id": 3821,
        "concept_name": "Pancreatitis - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH232",
        "phenotype_version_id": 464,
        "phenotype_name": "Pancreatitis",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "K85",
            "description": "Acute pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "K86.0",
            "description": "Alcohol-induced chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "K86.1",
            "description": "Other chronic pancreatitis",
            "attributes": {
              "Disease": "Pancreatitis",
              "Category": "Diagnosis of Pancreatitis"
            }
          },
          {
            "code": "K86.3",
            "description": "Pseudocyst of pancreas",
            "attributes": {
              "Disease": "Pancreatitis",
              "Category": "Diagnosis of Pancreatitis"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/cm5v-3365",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 464,
        "version_name": "Pancreatitis",
        "version_date": "2021-10-06T16:08:48.914521Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]