[
  {
    "phenotype_id": "PH2357",
    "phenotype_version_id": 5594,
    "name": "Codes for chronic neurological diseases with susceptibility for COVID 19",
    "definition": "This codelist was taken from [OpenCodelists](https://www.opencodelists.org/), created by [OpenSAFELY](https://www.opensafely.org/). We recommend viewing this Phenotype on the OpenCodelist website to view the most recent version.\n\n\nTaken from the `CNDATRISK2_COD` refset published by NHSD. Contains public sector information licensed under the UK Open Government Licence v3\\.0 (https://www.nationalarchives.gov.uk/doc/open\\-government\\-licence/version/3/).\n\n\n© University of Oxford for the Bennett Institute for Applied Data Science 2025\\. This work may be copied freely for non\\-commercial research and study.\n\n",
    "implementation": null,
    "publications": null,
    "validation": null,
    "citation_requirements": null,
    "created": "2026-01-26T22:09:49.537721Z",
    "author": "NHSD Primary Care Domain Refsets",
    "collections": [
      {
        "name": "OpenCodelist",
        "value": 31
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": {
      "id": 1,
      "slug": "opensafely",
      "name": "OpenSAFELY"
    },
    "world_access": 1,
    "updated": "2026-01-26T22:09:54.063649Z",
    "references": [],
    "signed_off": [],
    "methodology": "",
    "coding_system": [
      {
        "name": "SNOMED  CT codes",
        "value": 9
      }
    ],
    "open_codelist_id": "nhsd-primary-care-domain-refsets/cndatrisk2_cod",
    "source_reference": "https://www.opencodelists.org/codelist/nhsd-primary-care-domain-refsets/cndatrisk2_cod/20250912",
    "concept_information": [
      {
        "concept_id": 5771,
        "concept_version_id": 13256,
        "concept_name": "nhsd-primary-care-domain-refsets/cndatrisk2_cod/20250912",
        "coding_system": {
          "id": 9,
          "name": "SNOMED  CT codes",
          "description": "SNOMED CT codes"
        },
        "phenotype_id": "PH2357",
        "phenotype_version_id": 5594,
        "phenotype_name": "Codes for chronic neurological diseases with susceptibility for COVID 19",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "1010712009",
            "description": "Autosomal dominant Emery-Dreifuss muscular dystrophy",
            "attributes": null
          },
          {
            "code": "10394003",
            "description": "Friedreich ataxia",
            "attributes": null
          },
          {
            "code": "110270004",
            "description": "Sequela of infection caused by Human poliovirus",
            "attributes": null
          },
          {
            "code": "111501005",
            "description": "Congenital hereditary muscular dystrophy",
            "attributes": null
          },
          {
            "code": "111502003",
            "description": "Fukuyama congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "111503008",
            "description": "Merosin deficient congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "111504002",
            "description": "Walker-Warburg congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "111505001",
            "description": "Muscle-eye-brain disease, congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "111508004",
            "description": "Emery-Dreifuss muscular dystrophy",
            "attributes": null
          },
          {
            "code": "1197523001",
            "description": "Autosomal dominant amyotrophic lateral sclerosis type 1",
            "attributes": null
          },
          {
            "code": "1197524007",
            "description": "Autosomal recessive amyotrophic lateral sclerosis type 1",
            "attributes": null
          },
          {
            "code": "1201863001",
            "description": "Amyotrophic lateral sclerosis type 1",
            "attributes": null
          },
          {
            "code": "1201947005",
            "description": "Juvenile amyotrophic lateral sclerosis type 2",
            "attributes": null
          },
          {
            "code": "1201950008",
            "description": "Amyotrophic lateral sclerosis type 3",
            "attributes": null
          },
          {
            "code": "1201961000",
            "description": "Juvenile amyotrophic lateral sclerosis type 5",
            "attributes": null
          },
          {
            "code": "1204334005",
            "description": "Amyotrophic lateral sclerosis type 6",
            "attributes": null
          },
          {
            "code": "1204349002",
            "description": "Amyotrophic lateral sclerosis type 7",
            "attributes": null
          },
          {
            "code": "1204350002",
            "description": "Amyotrophic lateral sclerosis type 8",
            "attributes": null
          },
          {
            "code": "1204351003",
            "description": "Amyotrophic lateral sclerosis type 9",
            "attributes": null
          },
          {
            "code": "1208412003",
            "description": "Amyotrophic lateral sclerosis type 10",
            "attributes": null
          },
          {
            "code": "1208615009",
            "description": "Neurogenic scapuloperoneal syndrome Kaeser type",
            "attributes": null
          },
          {
            "code": "1212005",
            "description": "Childhood type dermatomyositis",
            "attributes": null
          },
          {
            "code": "1230273004",
            "description": "Megaconial congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "124122005",
            "description": "Deficiency of 3-hydroxyacyl-CoA dehydrogenase",
            "attributes": null
          },
          {
            "code": "124166007",
            "description": "Deficiency of butyryl-CoA dehydrogenase",
            "attributes": null
          },
          {
            "code": "124621004",
            "description": "Deficiency of enoyl-coenzyme A hydratase",
            "attributes": null
          },
          {
            "code": "1259038005",
            "description": "Autosomal dominant complex hereditary spastic paraplegia",
            "attributes": null
          },
          {
            "code": "1259121008",
            "description": "Amyotrophic lateral sclerosis, parkinsonism, dementia complex of West New Guinea",
            "attributes": null
          },
          {
            "code": "1259122001",
            "description": "Amyotrophic lateral sclerosis with parkinsonism",
            "attributes": null
          },
          {
            "code": "1259123006",
            "description": "Amyotrophic lateral sclerosis, parkinsonism, dementia complex of Kii Peninsula",
            "attributes": null
          },
          {
            "code": "1259124000",
            "description": "Amyotrophic lateral sclerosis with frontotemporal dementia",
            "attributes": null
          },
          {
            "code": "1259125004",
            "description": "Amyotrophic lateral sclerosis with multiple system atrophy",
            "attributes": null
          },
          {
            "code": "1259126003",
            "description": "Amyotrophic lateral sclerosis with autonomic dysfunction",
            "attributes": null
          },
          {
            "code": "1259127007",
            "description": "Amyotrophic lateral sclerosis with cerebellar dysfunction",
            "attributes": null
          },
          {
            "code": "1259129005",
            "description": "Amyotrophic lateral sclerosis with spinocerebellar ataxia",
            "attributes": null
          },
          {
            "code": "1260379008",
            "description": "Parkinsonism caused by dopamine receptor antagonist",
            "attributes": null
          },
          {
            "code": "1263497002",
            "description": "Motor neuron disease due to neoplastic disease",
            "attributes": null
          },
          {
            "code": "1263531001",
            "description": "Motor neuron disease due to and following radiotherapy to spinal cord",
            "attributes": null
          },
          {
            "code": "1263534009",
            "description": "Motor neuron disease due to herpes zoster",
            "attributes": null
          },
          {
            "code": "1263535005",
            "description": "Motor neuron disease due to human immunodeficiency virus infection",
            "attributes": null
          },
          {
            "code": "1263536006",
            "description": "Motor neuron disease due to hereditary spastic paraplegia",
            "attributes": null
          },
          {
            "code": "1263538007",
            "description": "Motor neuron disease due to gammopathy",
            "attributes": null
          },
          {
            "code": "1279839002",
            "description": "Spinocerebellar ataxia type 46",
            "attributes": null
          },
          {
            "code": "1279840000",
            "description": "Spinocerebellar ataxia type 45",
            "attributes": null
          },
          {
            "code": "128212001",
            "description": "Spinal muscular atrophy, type II",
            "attributes": null
          },
          {
            "code": "128213006",
            "description": "Neuromuscular junction disorder",
            "attributes": null
          },
          {
            "code": "128596003",
            "description": "Medium-chain acyl-coenzyme A dehydrogenase deficiency",
            "attributes": null
          },
          {
            "code": "1299151005",
            "description": "O'Sullivan McLeod syndrome",
            "attributes": null
          },
          {
            "code": "14289006",
            "description": "Myopathy in hypopituitarism",
            "attributes": null
          },
          {
            "code": "14637005",
            "description": "Late-infantile neuronal ceroid lipofuscinosis",
            "attributes": null
          },
          {
            "code": "16415791000119104",
            "description": "Myasthenia gravis in remission",
            "attributes": null
          },
          {
            "code": "16851005",
            "description": "Mitochondrial myopathy",
            "attributes": null
          },
          {
            "code": "1767005",
            "description": "Fisher's syndrome",
            "attributes": null
          },
          {
            "code": "186476008",
            "description": "Acute paralytic non-bulbar poliomyelitis",
            "attributes": null
          },
          {
            "code": "186478009",
            "description": "Acute paralytic poliomyelitis, vaccine-associated",
            "attributes": null
          },
          {
            "code": "186479001",
            "description": "Acute paralytic poliomyelitis, wild virus, imported",
            "attributes": null
          },
          {
            "code": "186480003",
            "description": "Acute paralytic poliomyelitis, wild virus, indigenous",
            "attributes": null
          },
          {
            "code": "192686004",
            "description": "Encephalitis caused by Human poliovirus",
            "attributes": null
          },
          {
            "code": "193206003",
            "description": "Persistent neonatal myasthenia gravis",
            "attributes": null
          },
          {
            "code": "193207007",
            "description": "Juvenile or adult myasthenia gravis",
            "attributes": null
          },
          {
            "code": "193209005",
            "description": "Myasthenic syndrome due to another disorder",
            "attributes": null
          },
          {
            "code": "193212008",
            "description": "Myasthenic syndrome due to hypothyroidism",
            "attributes": null
          },
          {
            "code": "193213003",
            "description": "Myasthenic syndrome due to pernicious anemia",
            "attributes": null
          },
          {
            "code": "193214009",
            "description": "Myasthenic syndrome due to thyrotoxicosis",
            "attributes": null
          },
          {
            "code": "193216006",
            "description": "Congenital and developmental myasthenia",
            "attributes": null
          },
          {
            "code": "193225000",
            "description": "Hereditary progressive muscular dystrophy",
            "attributes": null
          },
          {
            "code": "193227008",
            "description": "Pelvic muscular dystrophy",
            "attributes": null
          },
          {
            "code": "193230001",
            "description": "Distal muscular dystrophy with juvenile onset",
            "attributes": null
          },
          {
            "code": "193237003",
            "description": "Myotonic disorder",
            "attributes": null
          },
          {
            "code": "193238008",
            "description": "Infantile myotonia",
            "attributes": null
          },
          {
            "code": "193246009",
            "description": "Symptomatic inflammatory myopathy associated with another disorder",
            "attributes": null
          },
          {
            "code": "193248005",
            "description": "Myopathy due to disseminated lupus erythematosus",
            "attributes": null
          },
          {
            "code": "193249002",
            "description": "Myopathy due to polyarteritis nodosa",
            "attributes": null
          },
          {
            "code": "193250002",
            "description": "Myopathy due to rheumatoid arthritis",
            "attributes": null
          },
          {
            "code": "193251003",
            "description": "Sarcoid myopathy",
            "attributes": null
          },
          {
            "code": "193252005",
            "description": "Myopathy due to scleroderma",
            "attributes": null
          },
          {
            "code": "193253000",
            "description": "Myopathy due to Sjögren's disease",
            "attributes": null
          },
          {
            "code": "195206000",
            "description": "Intermittent cerebral ischemia",
            "attributes": null
          },
          {
            "code": "196136009",
            "description": "Lung disease co-occurrent with polymyositis",
            "attributes": null
          },
          {
            "code": "19972008",
            "description": "Postencephalitic parkinsonism",
            "attributes": null
          },
          {
            "code": "21764004",
            "description": "Renal carnitine transport defect",
            "attributes": null
          },
          {
            "code": "22062008",
            "description": "X-linked glutaric aciduria, type 2",
            "attributes": null
          },
          {
            "code": "22886006",
            "description": "Glutaric aciduria, type 2",
            "attributes": null
          },
          {
            "code": "230237004",
            "description": "Progressive spinocerebellar ataxia with decreased tendon reflexes",
            "attributes": null
          },
          {
            "code": "230238009",
            "description": "Progressive spinocerebellar ataxia with retained tendon reflexes",
            "attributes": null
          },
          {
            "code": "230246005",
            "description": "Progressive bulbar palsy of childhood",
            "attributes": null
          },
          {
            "code": "230247001",
            "description": "Distal spinal muscular atrophy",
            "attributes": null
          },
          {
            "code": "230248006",
            "description": "Scapuloperoneal spinal muscular atrophy",
            "attributes": null
          },
          {
            "code": "230249003",
            "description": "Facioscapulohumeral spinal muscular atrophy",
            "attributes": null
          },
          {
            "code": "230250003",
            "description": "Facioscapulohumeral spinal muscular atrophy with sensory loss",
            "attributes": null
          },
          {
            "code": "230251004",
            "description": "Scapulohumeral spinal muscular atrophy",
            "attributes": null
          },
          {
            "code": "230252006",
            "description": "Oculopharyngeal spinal muscular atrophy",
            "attributes": null
          },
          {
            "code": "230253001",
            "description": "Bulbospinal neuronopathy",
            "attributes": null
          },
          {
            "code": "230254007",
            "description": "Western Pacific motor neurone disease",
            "attributes": null
          },
          {
            "code": "230255008",
            "description": "Madras-type motor neurone disease",
            "attributes": null
          },
          {
            "code": "230257000",
            "description": "Paraneoplastic motor neurone disease",
            "attributes": null
          },
          {
            "code": "230258005",
            "description": "Amyotrophic lateral sclerosis with dementia",
            "attributes": null
          },
          {
            "code": "230264003",
            "description": "Troyer syndrome",
            "attributes": null
          },
          {
            "code": "230274000",
            "description": "Frontal lobe degeneration with motor neurone disease",
            "attributes": null
          },
          {
            "code": "230291001",
            "description": "Juvenile Parkinson's disease",
            "attributes": null
          },
          {
            "code": "230292008",
            "description": "Secondary parkinsonism",
            "attributes": null
          },
          {
            "code": "230296006",
            "description": "Vascular parkinsonism",
            "attributes": null
          },
          {
            "code": "230301006",
            "description": "Akinetic-rigid form of Huntington's disease",
            "attributes": null
          },
          {
            "code": "230669004",
            "description": "Genetically determined myasthenia",
            "attributes": null
          },
          {
            "code": "230670003",
            "description": "Familial infantile myasthenia",
            "attributes": null
          },
          {
            "code": "230671004",
            "description": "Acetylcholine resynthesis deficiency",
            "attributes": null
          },
          {
            "code": "230672006",
            "description": "Congenital myasthenic syndrome",
            "attributes": null
          },
          {
            "code": "230673001",
            "description": "Congenital end-plate acetylcholine receptor deficiency",
            "attributes": null
          },
          {
            "code": "230674007",
            "description": "Pseudomyopathic myasthenia",
            "attributes": null
          },
          {
            "code": "230675008",
            "description": "Slow channel syndrome",
            "attributes": null
          },
          {
            "code": "230676009",
            "description": "Putative defect in acetylcholine synthesis or packaging",
            "attributes": null
          },
          {
            "code": "230677000",
            "description": "Congenital end-plate acetylcholinesterase deficiency",
            "attributes": null
          },
          {
            "code": "230678005",
            "description": "Decrease of motor end-plate potential amplitude without acetylcholine receptor deficiency",
            "attributes": null
          },
          {
            "code": "230679002",
            "description": "Abnormality of synaptic vesicles",
            "attributes": null
          },
          {
            "code": "230682007",
            "description": "Penicillamine-induced myasthenia",
            "attributes": null
          },
          {
            "code": "230685009",
            "description": "Myasthenia gravis associated with thymoma",
            "attributes": null
          },
          {
            "code": "230686005",
            "description": "Generalized myasthenia",
            "attributes": null
          },
          {
            "code": "230687001",
            "description": "Myopathy in myasthenia gravis",
            "attributes": null
          },
          {
            "code": "230702001",
            "description": "Ataxic hemiparesis due to and following lacunar infarction",
            "attributes": null
          },
          {
            "code": "230703006",
            "description": "Dysarthria-clumsy hand syndrome due to and following lacunar infarction",
            "attributes": null
          },
          {
            "code": "230784003",
            "description": "Congenital pseudobulbar palsy",
            "attributes": null
          },
          {
            "code": "237997005",
            "description": "Very long chain acyl-coenzyme A dehydrogenase deficiency",
            "attributes": null
          },
          {
            "code": "237999008",
            "description": "Mitochondrial trifunctional protein deficiency",
            "attributes": null
          },
          {
            "code": "238001003",
            "description": "Carnitine palmitoyltransferase I deficiency",
            "attributes": null
          },
          {
            "code": "238002005",
            "description": "Carnitine palmitoyltransferase II deficiency",
            "attributes": null
          },
          {
            "code": "238003000",
            "description": "Carnitine acylcarnitine translocase deficiency",
            "attributes": null
          },
          {
            "code": "238026007",
            "description": "Infantile GM1 gangliosidosis",
            "attributes": null
          },
          {
            "code": "238936001",
            "description": "Sclerodermatomyositis",
            "attributes": null
          },
          {
            "code": "239898008",
            "description": "Polymyositis with malignant disease",
            "attributes": null
          },
          {
            "code": "239899000",
            "description": "Polymyositis associated with autoimmune disease",
            "attributes": null
          },
          {
            "code": "239901009",
            "description": "Dermatomyositis with malignant disease",
            "attributes": null
          },
          {
            "code": "240046001",
            "description": "Muscular dystrophy with predominantly proximal limb girdle distribution",
            "attributes": null
          },
          {
            "code": "240047005",
            "description": "X-linked muscular dystrophy with limb girdle distribution",
            "attributes": null
          },
          {
            "code": "240048000",
            "description": "X-linked muscular dystrophy with abnormal dystrophin",
            "attributes": null
          },
          {
            "code": "240049008",
            "description": "Intermediate X-linked muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240050008",
            "description": "Manifesting female carrier of X-linked muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240051007",
            "description": "X-linked limb girdle muscular dystrophy with normal dystrophin",
            "attributes": null
          },
          {
            "code": "240052000",
            "description": "Ji muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240053005",
            "description": "Hereditary myopathy limited to females",
            "attributes": null
          },
          {
            "code": "240054004",
            "description": "Autosomal recessive muscular dystrophy with limb girdle distribution",
            "attributes": null
          },
          {
            "code": "240055003",
            "description": "Autosomal recessive muscular dystrophy with abnormal dystrophin-associated glycoprotein",
            "attributes": null
          },
          {
            "code": "240056002",
            "description": "Severe autosomal recessive muscular dystrophy of childhood - North African type",
            "attributes": null
          },
          {
            "code": "240058001",
            "description": "Reunion-Indiana Amish type muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240059009",
            "description": "Congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240060004",
            "description": "Western type of congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240061000",
            "description": "Congenital muscular dystrophy with arthrogryposis multiplex congenita",
            "attributes": null
          },
          {
            "code": "240062007",
            "description": "Ullrich congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240063002",
            "description": "Eichsfeld type congenital muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240064008",
            "description": "Hutterite type of muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240065009",
            "description": "Adult onset autosomal recessive muscular dystrophy with normal dystrophin",
            "attributes": null
          },
          {
            "code": "240067001",
            "description": "Autosomal dominant muscular dystrophy with limb girdle distribution",
            "attributes": null
          },
          {
            "code": "240068006",
            "description": "Autosomal dominant muscular dystrophy with gene located at 5q31",
            "attributes": null
          },
          {
            "code": "240069003",
            "description": "Late onset proximal muscular dystrophy with dysarthria",
            "attributes": null
          },
          {
            "code": "240070002",
            "description": "Muscular dystrophy not predominantly limb girdle in distribution",
            "attributes": null
          },
          {
            "code": "240071003",
            "description": "X-linked muscular dystrophy not predominantly limb girdle",
            "attributes": null
          },
          {
            "code": "240072005",
            "description": "Benign scapuloperoneal muscular dystrophy with cardiomyopathy",
            "attributes": null
          },
          {
            "code": "240073000",
            "description": "Autosomal recessive muscular dystrophy not predominantly limb girdle",
            "attributes": null
          },
          {
            "code": "240074006",
            "description": "Scapulohumeral muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240075007",
            "description": "Autosomal dominant muscular dystrophy not predominantly limb girdle",
            "attributes": null
          },
          {
            "code": "240076008",
            "description": "Benign scapuloperoneal muscular dystrophy",
            "attributes": null
          },
          {
            "code": "240077004",
            "description": "Severe scapuloperoneal muscular dystrophy with cardiomyopathy",
            "attributes": null
          },
          {
            "code": "240078009",
            "description": "Benign congenital muscular dystrophy with finger flexion contractures",
            "attributes": null
          },
          {
            "code": "240460008",
            "description": "Acute paralytic poliomyelitis",
            "attributes": null
          },
          {
            "code": "240630008",
            "description": "Hyperreactive malarial splenomegaly syndrome",
            "attributes": null
          },
          {
            "code": "24654003",
            "description": "Weber-Gubler syndrome",
            "attributes": null
          },
          {
            "code": "249892007",
            "description": "Progressive pseudobulbar palsy",
            "attributes": null
          },
          {
            "code": "25425008",
            "description": "Autosomal recessive glutaric aciduria, type 2",
            "attributes": null
          },
          {
            "code": "256321009",
            "description": "Disorder of neuromuscular transmission",
            "attributes": null
          },
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