[ { "phenotype_id": "PH253", "phenotype_version_id": 506, "name": "Primary Malignancy_Cervical", "definition": "At the specified date, a patient is defined as having had Primary Malignancy Cervical IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Primary Malignancy_Cervical diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Primary Malignancy_Cervical or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:09:48.925099Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:09:48.925144Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Primary-Malignancy_Cervical---e9e6a220-17aa-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Primary-Malignancy_Cervical.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 1403, "concept_version_id": 3945, "concept_name": "Primary Malignancy_Cervical - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH253", "phenotype_version_id": 506, "phenotype_name": "Primary Malignancy_Cervical", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "B41..00", "description": "Malignant neoplasm of cervix uteri", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "2747.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B410.00", "description": "Malignant neoplasm of endocervix", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "48820.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B410000", "description": "Malignant neoplasm of endocervical canal", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "57235.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B410100", "description": "Malignant neoplasm of endocervical gland", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "53103.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B410z00", "description": "Malignant neoplasm of endocervix NOS", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "50285.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B411.00", "description": "Malignant neoplasm of exocervix", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "50297.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41..11", "description": "Cervical carcinoma (uterus)", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "3230.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B412.00", "description": "Malignant neoplasm, overlapping lesion of cervix uteri", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "58094.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41y.00", "description": "Malignant neoplasm of other site of cervix", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "32955.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41y000", "description": "Malignant neoplasm of cervical stump", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "95505.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41y100", "description": "Malignant neoplasm of squamocolumnar junction of cervix", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "57719.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41yz00", "description": "Malignant neoplasm of other site of cervix NOS", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "43435.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "B41z.00", "description": "Malignant neoplasm of cervix uteri NOS", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "28311.0", "Category": "Diagnosis of Primary Malignancy_Cervical" } }, { "code": "ZV10411", "description": "[V]Personal history of malignant neoplasm of cervix uteri", "attributes": { "Disease": "Primary Malignancy_Cervical", "Medcode": "23936.0", "Category": "History of Primary Malignancy_Cervical" } } ] }, { "concept_id": 1404, "concept_version_id": 3947, "concept_name": "Primary Malignancy_Cervical - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH253", "phenotype_version_id": 506, "phenotype_name": "Primary Malignancy_Cervical", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "23936.0", "description": "History of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "[V]Personal history of malignant neoplasm of cervix uteri", "Readcode": "ZV10411" } }, { "code": "2747.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of cervix uteri", "Readcode": "B41..00" } }, { "code": "28311.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of cervix uteri NOS", "Readcode": "B41z.00" } }, { "code": "3230.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Cervical carcinoma (uterus)", "Readcode": "B41..11" } }, { "code": "32955.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of other site of cervix", "Readcode": "B41y.00" } }, { "code": "43435.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of other site of cervix NOS", "Readcode": "B41yz00" } }, { "code": "48820.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of endocervix", "Readcode": "B410.00" } }, { "code": "50285.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of endocervix NOS", "Readcode": "B410z00" } }, { "code": "50297.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of exocervix", "Readcode": "B411.00" } }, { "code": "53103.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of endocervical gland", "Readcode": "B410100" } }, { "code": "57235.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of endocervical canal", "Readcode": "B410000" } }, { "code": "57719.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of squamocolumnar junction of cervix", "Readcode": "B41y100" } }, { "code": "58094.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm, overlapping lesion of cervix uteri", "Readcode": "B412.00" } }, { "code": "95505.0", "description": "Diagnosis of Primary Malignancy_Cervical", "attributes": { "Disease": "Primary Malignancy_Cervical", "ReadcodeDescr": "Malignant neoplasm of cervical stump", "Readcode": "B41y000" } } ] }, { "concept_id": 1405, "concept_version_id": 3949, "concept_name": "Primary Malignancy_Cervical - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH253", "phenotype_version_id": 506, "phenotype_name": "Primary Malignancy_Cervical", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "C53", "description": "Malignant neoplasm of cervix uteri", "attributes": { "Disease": "Primary Malignancy_Cervical", "Category": "Diagnosis of Primary Malignancy_Cervical" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/b2fg-2967", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 506, "version_name": "Primary Malignancy_Cervical", "version_date": "2021-10-06T16:09:48.996086Z", "is_published": true, "is_latest": true } ] } ]