[
  {
    "phenotype_id": "PH258",
    "phenotype_version_id": 516,
    "name": "Primary Malignancy_Mesothelioma",
    "definition": "At the specified date, a patient is defined as having had Primary Malignancy Mesothelioma IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Primary Malignancy_Mesothelioma diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Primary Malignancy_Mesothelioma or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:10:01.546590Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:10:01.546617Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Primary-Malignancy_Mesothelioma---dfda1580-17ac-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Primary-Malignancy_Mesothelioma.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1418,
        "concept_version_id": 3975,
        "concept_name": "Primary Malignancy_Mesothelioma - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH258",
        "phenotype_version_id": 516,
        "phenotype_name": "Primary Malignancy_Mesothelioma",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "BBP1.00",
            "description": "[M]Mesothelioma, malignant",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "Medcode": "27509.0",
              "Category": "Diagnosis of Primary Malignancy_Mesothelioma"
            }
          },
          {
            "code": "BBP3.11",
            "description": "[M]Sarcomatoid mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "Medcode": "104720.0",
              "Category": "Diagnosis of Primary Malignancy_Mesothelioma"
            }
          },
          {
            "code": "BBP5.00",
            "description": "[M]Epithelioid mesothelioma, malignant",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "Medcode": "47734.0",
              "Category": "Diagnosis of Primary Malignancy_Mesothelioma"
            }
          },
          {
            "code": "BBP7.00",
            "description": "[M]Mesothelioma, biphasic type, malignant",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "Medcode": "86820.0",
              "Category": "Diagnosis of Primary Malignancy_Mesothelioma"
            }
          }
        ]
      },
      {
        "concept_id": 1419,
        "concept_version_id": 3977,
        "concept_name": "Primary Malignancy_Mesothelioma - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH258",
        "phenotype_version_id": 516,
        "phenotype_name": "Primary Malignancy_Mesothelioma",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "104720.0",
            "description": "Diagnosis of Primary Malignancy_Mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "ReadcodeDescr": "[M]Sarcomatoid mesothelioma",
              "Readcode": "BBP3.11"
            }
          },
          {
            "code": "27509.0",
            "description": "Diagnosis of Primary Malignancy_Mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "ReadcodeDescr": "[M]Mesothelioma, malignant",
              "Readcode": "BBP1.00"
            }
          },
          {
            "code": "47734.0",
            "description": "Diagnosis of Primary Malignancy_Mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "ReadcodeDescr": "[M]Epithelioid mesothelioma, malignant",
              "Readcode": "BBP5.00"
            }
          },
          {
            "code": "86820.0",
            "description": "Diagnosis of Primary Malignancy_Mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "ReadcodeDescr": "[M]Mesothelioma, biphasic type, malignant",
              "Readcode": "BBP7.00"
            }
          }
        ]
      },
      {
        "concept_id": 1420,
        "concept_version_id": 3979,
        "concept_name": "Primary Malignancy_Mesothelioma - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH258",
        "phenotype_version_id": 516,
        "phenotype_name": "Primary Malignancy_Mesothelioma",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "C45",
            "description": "Mesothelioma",
            "attributes": {
              "Disease": "Primary Malignancy_Mesothelioma",
              "Category": "Diagnosis of Primary Malignancy_Mesothelioma"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/45vy-aa05",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 516,
        "version_name": "Primary Malignancy_Mesothelioma",
        "version_date": "2021-10-06T16:10:01.574469Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]