[ { "phenotype_id": "PH264", "phenotype_version_id": 528, "name": "Primary Malignancy_Pancreatic", "definition": "At the specified date, a patient is defined as having had Primary Malignancy Pancreatic IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Primary Malignancy Pancreatic diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Primary Malignancy Pancreatic or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:10:22.972932Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:10:22.972961Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Primary-Malignancy_Pancreatic---6fb057a0-17b2-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Primary-Malignancy_Pancreatic.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 1436, "concept_version_id": 4011, "concept_name": "Primary Malignancy_Pancreatic - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH264", "phenotype_version_id": 528, "phenotype_name": "Primary Malignancy_Pancreatic", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "B17..00", "description": "Malignant neoplasm of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "8166.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B170.00", "description": "Malignant neoplasm of head of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "8771.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B171.00", "description": "Malignant neoplasm of body of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "40810.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B172.00", "description": "Malignant neoplasm of tail of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "39870.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B173.00", "description": "Malignant neoplasm of pancreatic duct", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "35535.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B174.00", "description": "Malignant neoplasm of Islets of Langerhans", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "35795.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B175.00", "description": "Malignant neoplasm, overlapping lesion of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "97875.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B17y.00", "description": "Malignant neoplasm of other specified sites of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "48537.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B17y000", "description": "Malignant neoplasm of ectopic pancreatic tissue", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "96635.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B17yz00", "description": "Malignant neoplasm of specified site of pancreas NOS", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "95783.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "B17z.00", "description": "Malignant neoplasm of pancreas NOS", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "34388.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "BB5B100", "description": "[M]Islet cell carcinoma", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "63102.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "BB5B300", "description": "[M]Insulinoma, malignant", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "95609.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "BB5B500", "description": "[M]Glucagonoma, malignant", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "32294.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "BB5B600", "description": "[M]Mixed islet cell and exocrine adenocarcinoma", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "98825.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } }, { "code": "BB5C100", "description": "[M]Gastrinoma, malignant", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Medcode": "49629.0", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } } ] }, { "concept_id": 1437, "concept_version_id": 4013, "concept_name": "Primary Malignancy_Pancreatic - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH264", "phenotype_version_id": 528, "phenotype_name": "Primary Malignancy_Pancreatic", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "32294.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "[M]Glucagonoma, malignant", "Readcode": "BB5B500" } }, { "code": "34388.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of pancreas NOS", "Readcode": "B17z.00" } }, { "code": "35535.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of pancreatic duct", "Readcode": "B173.00" } }, { "code": "35795.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of Islets of Langerhans", "Readcode": "B174.00" } }, { "code": "39870.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of tail of pancreas", "Readcode": "B172.00" } }, { "code": "40810.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of body of pancreas", "Readcode": "B171.00" } }, { "code": "48537.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of other specified sites of pancreas", "Readcode": "B17y.00" } }, { "code": "49629.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "[M]Gastrinoma, malignant", "Readcode": "BB5C100" } }, { "code": "63102.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "[M]Islet cell carcinoma", "Readcode": "BB5B100" } }, { "code": "8166.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of pancreas", "Readcode": "B17..00" } }, { "code": "8771.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of head of pancreas", "Readcode": "B170.00" } }, { "code": "95609.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "[M]Insulinoma, malignant", "Readcode": "BB5B300" } }, { "code": "95783.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of specified site of pancreas NOS", "Readcode": "B17yz00" } }, { "code": "96635.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm of ectopic pancreatic tissue", "Readcode": "B17y000" } }, { "code": "97875.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "Malignant neoplasm, overlapping lesion of pancreas", "Readcode": "B175.00" } }, { "code": "98825.0", "description": "Diagnosis of Primary Malignancy_Pancreatic", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "ReadcodeDescr": "[M]Mixed islet cell and exocrine adenocarcinoma", "Readcode": "BB5B600" } } ] }, { "concept_id": 1438, "concept_version_id": 4015, "concept_name": "Primary Malignancy_Pancreatic - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH264", "phenotype_version_id": 528, "phenotype_name": "Primary Malignancy_Pancreatic", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "C25", "description": "Malignant neoplasm of pancreas", "attributes": { "Disease": "Primary Malignancy_Pancreatic", "Category": "Diagnosis of Primary Malignancy_Pancreatic" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/5k5a-5j36", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 528, "version_name": "Primary Malignancy_Pancreatic", "version_date": "2021-10-06T16:10:23.005196Z", "is_published": true, "is_latest": true } ] } ]