[ { "phenotype_id": "PH276", "phenotype_version_id": 552, "name": "Other interstitial pulmonary diseases with fibrosis", "definition": "At the specified date, a patient is defined as having had Other interstitial pulmonary diseases with fibrosis IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Other interstitial pulmonary diseases with fibrosis diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of Other interstitial pulmonary diseases with fibrosis or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:10:51.299024Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:10:51.299052Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Other-interstitial-pulmonary-diseases-with-fibrosis---641f8a10-17b6-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Other-interstitial-pulmonary-diseases-with-fibrosis.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 1473, "concept_version_id": 4085, "concept_name": "Other interstitial pulmonary diseases with fibrosis - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH276", "phenotype_version_id": 552, "phenotype_name": "Other interstitial pulmonary diseases with fibrosis", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "23E5.00", "description": "O/E - fibrosis of lung present", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "2680.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "23E5.11", "description": "O/E - fibrosis of lung", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "7994.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H55..00", "description": "Postinflammatory pulmonary fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "7791.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H55..11", "description": "Cirrhosis of lung", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "40953.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563.00", "description": "Idiopathic fibrosing alveolitis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "6837.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563100", "description": "Diffuse pulmonary fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "6051.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563.11", "description": "Hamman - Rich syndrome", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "63174.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563.12", "description": "Cryptogenic fibrosing alveolitis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "5519.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563.13", "description": "Idiopathic pulmonary fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "103753.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563200", "description": "Pulmonary fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "103472.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563300", "description": "Usual interstitial pneumonitis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "103559.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "H563z00", "description": "Idiopathic fibrosing alveolitis NOS", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "28229.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } }, { "code": "Hyu5000", "description": "[X]Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Medcode": "65060.0", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } } ] }, { "concept_id": 1474, "concept_version_id": 4087, "concept_name": "Other interstitial pulmonary diseases with fibrosis - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH276", "phenotype_version_id": 552, "phenotype_name": "Other interstitial pulmonary diseases with fibrosis", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "103472.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Pulmonary fibrosis", "Readcode": "H563200" } }, { "code": "103559.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Usual interstitial pneumonitis", "Readcode": "H563300" } }, { "code": "103753.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Idiopathic pulmonary fibrosis", "Readcode": "H563.13" } }, { "code": "2680.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "O/E - fibrosis of lung present", "Readcode": "23E5.00" } }, { "code": "28229.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Idiopathic fibrosing alveolitis NOS", "Readcode": "H563z00" } }, { "code": "40953.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Cirrhosis of lung", "Readcode": "H55..11" } }, { "code": "5519.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Cryptogenic fibrosing alveolitis", "Readcode": "H563.12" } }, { "code": "6051.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Diffuse pulmonary fibrosis", "Readcode": "H563100" } }, { "code": "63174.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Hamman - Rich syndrome", "Readcode": "H563.11" } }, { "code": "65060.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "[X]Other interstitial pulmonary diseases with fibrosis", "Readcode": "Hyu5000" } }, { "code": "6837.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Idiopathic fibrosing alveolitis", "Readcode": "H563.00" } }, { "code": "7791.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "Postinflammatory pulmonary fibrosis", "Readcode": "H55..00" } }, { "code": "7994.0", "description": "Diagnosis of Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "ReadcodeDescr": "O/E - fibrosis of lung", "Readcode": "23E5.11" } } ] }, { "concept_id": 1475, "concept_version_id": 4089, "concept_name": "Other interstitial pulmonary diseases with fibrosis - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH276", "phenotype_version_id": 552, "phenotype_name": "Other interstitial pulmonary diseases with fibrosis", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "J84.1", "description": "Other interstitial pulmonary diseases with fibrosis", "attributes": { "Disease": "Other interstitial pulmonary diseases with fibrosis", "Category": "Diagnosis of Other interstitial pulmonary diseases with fibrosis" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/yfyk-yt54", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 552, "version_name": "Other interstitial pulmonary diseases with fibrosis", "version_date": "2021-10-06T16:10:51.331490Z", "is_published": true, "is_latest": true } ] } ]