[ { "phenotype_id": "PH279", "phenotype_version_id": 558, "name": "Respiratory failure", "definition": "At the specified date, a patient is defined as having had 'Respiratory failure' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Other 'Respiratory failure' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of 'Respiratory failure' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:10:58.040714Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:10:58.040742Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Respiratory-failure---2e0c8080-17b7-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Respiratory-failure.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 1482, "concept_version_id": 4103, "concept_name": "Respiratory failure - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH279", "phenotype_version_id": 558, "phenotype_name": "Respiratory failure", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "Fy04.00", "description": "Sleep-related respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "38686.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "H59..00", "description": "Respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "25249.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "H590.00", "description": "Acute respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "37961.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "H591.00", "description": "Chronic respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "24814.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "H592.00", "description": "Chronic type 1 respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "94946.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "H593.00", "description": "Chronic type 2 respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "94486.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "R2y1.00", "description": "[D]Respiratory failure", "attributes": { "Disease": "Respiratory failure", "Medcode": "3959.0", "Category": "Diagnosis of Respiratory failure" } }, { "code": "R2y1z00", "description": "[D]Respiratory failure NOS", "attributes": { "Disease": "Respiratory failure", "Medcode": "15779.0", "Category": "Diagnosis of Respiratory failure" } } ] }, { "concept_id": 1483, "concept_version_id": 4105, "concept_name": "Respiratory failure - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH279", "phenotype_version_id": 558, "phenotype_name": "Respiratory failure", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "15779.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "[D]Respiratory failure NOS", "Readcode": "R2y1z00" } }, { "code": "24814.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Chronic respiratory failure", "Readcode": "H591.00" } }, { "code": "25249.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Respiratory failure", "Readcode": "H59..00" } }, { "code": "37961.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Acute respiratory failure", "Readcode": "H590.00" } }, { "code": "38686.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Sleep-related respiratory failure", "Readcode": "Fy04.00" } }, { "code": "3959.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "[D]Respiratory failure", "Readcode": "R2y1.00" } }, { "code": "94486.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Chronic type 2 respiratory failure", "Readcode": "H593.00" } }, { "code": "94946.0", "description": "Diagnosis of Respiratory failure", "attributes": { "Disease": "Respiratory failure", "ReadcodeDescr": "Chronic type 1 respiratory failure", "Readcode": "H592.00" } } ] }, { "concept_id": 1484, "concept_version_id": 4107, "concept_name": "Respiratory failure - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH279", "phenotype_version_id": 558, "phenotype_name": "Respiratory failure", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "J96", "description": "Respiratory failure, not elsewhere classified", "attributes": { "Disease": "Respiratory failure", "Category": "Diagnosis of Respiratory failure" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/jfm3-se28", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 558, "version_name": "Respiratory failure", "version_date": "2021-10-06T16:10:58.068327Z", "is_published": true, "is_latest": true } ] } ]