[
  {
    "phenotype_id": "PH284",
    "phenotype_version_id": 568,
    "name": "Sarcoidosis",
    "definition": "At the specified date, a patient is defined as having had 'Sarcoidosis' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Sarcoidosis' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of 'Sarcoidosis' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:11:10.862841Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:11:10.862869Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Sarcoidosis---11d6c090-17b9-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Sarcoidosis.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1498,
        "concept_version_id": 4135,
        "concept_name": "Sarcoidosis - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH284",
        "phenotype_version_id": 568,
        "phenotype_name": "Sarcoidosis",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "AD5..00",
            "description": "Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "3865.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD50.00",
            "description": "Sarcoidosis of lung",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "33980.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD51.00",
            "description": "Sarcoidosis of lymph nodes",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "49075.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD52.00",
            "description": "Sarcoidosis of lung with sarcoidosis of lymph nodes",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "58841.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD53.00",
            "description": "Sarcoidosis of skin",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "27769.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD53000",
            "description": "Lupus pernio",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "28952.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD54.00",
            "description": "Sarcoidosis of inferior turbinates",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "72595.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "AD55.00",
            "description": "Sarcoid arthropathy",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "40613.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "Cyu0600",
            "description": "[X]Sarcoidosis of other and combined sites",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "73284.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "F013.00",
            "description": "Meningitis due to sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "49454.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "F326300",
            "description": "Multiple cranial nerve palsies in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "55612.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "F374900",
            "description": "Polyneuropathy in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "40751.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "F396500",
            "description": "Myopathy due to sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "52519.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "G558300",
            "description": "Sarcoid heart disease",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "47037.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "G5y7.00",
            "description": "Sarcoid myocarditis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "34437.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "H57y200",
            "description": "Pulmonary sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "3859.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "J63A.00",
            "description": "Hepatic granulomas in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "26405.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "N233200",
            "description": "Myositis in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Medcode": "47718.0",
              "Category": "Diagnosis of Sarcoidosis"
            }
          }
        ]
      },
      {
        "concept_id": 1499,
        "concept_version_id": 4137,
        "concept_name": "Sarcoidosis - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH284",
        "phenotype_version_id": 568,
        "phenotype_name": "Sarcoidosis",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "26405.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Hepatic granulomas in sarcoidosis",
              "Readcode": "J63A.00"
            }
          },
          {
            "code": "27769.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis of skin",
              "Readcode": "AD53.00"
            }
          },
          {
            "code": "28952.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Lupus pernio",
              "Readcode": "AD53000"
            }
          },
          {
            "code": "33980.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis of lung",
              "Readcode": "AD50.00"
            }
          },
          {
            "code": "34437.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoid myocarditis",
              "Readcode": "G5y7.00"
            }
          },
          {
            "code": "3859.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Pulmonary sarcoidosis",
              "Readcode": "H57y200"
            }
          },
          {
            "code": "3865.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis",
              "Readcode": "AD5..00"
            }
          },
          {
            "code": "40613.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoid arthropathy",
              "Readcode": "AD55.00"
            }
          },
          {
            "code": "40751.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Polyneuropathy in sarcoidosis",
              "Readcode": "F374900"
            }
          },
          {
            "code": "47037.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoid heart disease",
              "Readcode": "G558300"
            }
          },
          {
            "code": "47718.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Myositis in sarcoidosis",
              "Readcode": "N233200"
            }
          },
          {
            "code": "49075.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis of lymph nodes",
              "Readcode": "AD51.00"
            }
          },
          {
            "code": "49454.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Meningitis due to sarcoidosis",
              "Readcode": "F013.00"
            }
          },
          {
            "code": "52519.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Myopathy due to sarcoidosis",
              "Readcode": "F396500"
            }
          },
          {
            "code": "55612.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Multiple cranial nerve palsies in sarcoidosis",
              "Readcode": "F326300"
            }
          },
          {
            "code": "58841.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis of lung with sarcoidosis of lymph nodes",
              "Readcode": "AD52.00"
            }
          },
          {
            "code": "72595.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "Sarcoidosis of inferior turbinates",
              "Readcode": "AD54.00"
            }
          },
          {
            "code": "73284.0",
            "description": "Diagnosis of Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "ReadcodeDescr": "[X]Sarcoidosis of other and combined sites",
              "Readcode": "Cyu0600"
            }
          }
        ]
      },
      {
        "concept_id": 1500,
        "concept_version_id": 4139,
        "concept_name": "Sarcoidosis - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH284",
        "phenotype_version_id": 568,
        "phenotype_name": "Sarcoidosis",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "D86",
            "description": "Sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "G53.2",
            "description": "Multiple cranial nerve palsies in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Category": "Diagnosis of Sarcoidosis"
            }
          },
          {
            "code": "M63.3",
            "description": "Myositis in sarcoidosis",
            "attributes": {
              "Disease": "Sarcoidosis",
              "Category": "Diagnosis of Sarcoidosis"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/9rtv-pv86",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 568,
        "version_name": "Sarcoidosis",
        "version_date": "2021-10-06T16:11:10.889716Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]