[
  {
    "phenotype_id": "PH291",
    "phenotype_version_id": 582,
    "name": "Secondary Malignancy_Bone",
    "definition": "At the specified date, a patient is defined as having had Secondary Malignancy Bone IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Secondary Malignancy Bone diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Secondary Malignancy Bone or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:11:29.048113Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:11:29.048139Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Secondary-Malignancy_Bone---621aee30-17bb-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Secondary-Malignancy_Bone.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1519,
        "concept_version_id": 4177,
        "concept_name": "Secondary Malignancy_Bone - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH291",
        "phenotype_version_id": 582,
        "phenotype_name": "Secondary Malignancy_Bone",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "B585.00",
            "description": "Secondary malignant neoplasm of bone and bone marrow",
            "attributes": {
              "Disease": "Secondary Malignancy_Bone",
              "Medcode": "7654.0",
              "Category": "Diagnosis of Secondary Malignancy_Bone"
            }
          },
          {
            "code": "B585000",
            "description": "Pathological fracture due to metastatic bone disease",
            "attributes": {
              "Disease": "Secondary Malignancy_Bone",
              "Medcode": "18676.0",
              "Category": "Diagnosis of Secondary Malignancy_Bone"
            }
          }
        ]
      },
      {
        "concept_id": 1520,
        "concept_version_id": 4179,
        "concept_name": "Secondary Malignancy_Bone - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH291",
        "phenotype_version_id": 582,
        "phenotype_name": "Secondary Malignancy_Bone",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "18676.0",
            "description": "Diagnosis of Secondary Malignancy_Bone",
            "attributes": {
              "Disease": "Secondary Malignancy_Bone",
              "ReadcodeDescr": "Pathological fracture due to metastatic bone disease",
              "Readcode": "B585000"
            }
          },
          {
            "code": "7654.0",
            "description": "Diagnosis of Secondary Malignancy_Bone",
            "attributes": {
              "Disease": "Secondary Malignancy_Bone",
              "ReadcodeDescr": "Secondary malignant neoplasm of bone and bone marrow",
              "Readcode": "B585.00"
            }
          }
        ]
      },
      {
        "concept_id": 1521,
        "concept_version_id": 4181,
        "concept_name": "Secondary Malignancy_Bone - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH291",
        "phenotype_version_id": 582,
        "phenotype_name": "Secondary Malignancy_Bone",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "C79.5",
            "description": "Secondary malignant neoplasm of bone and bone marrow",
            "attributes": {
              "Disease": "Secondary Malignancy_Bone",
              "Category": "Diagnosis of Secondary Malignancy_Bone"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/7fqt-xc94",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 582,
        "version_name": "Secondary Malignancy_Bone",
        "version_date": "2021-10-06T16:11:29.076786Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]