[ { "phenotype_id": "PH293", "phenotype_version_id": 586, "name": "Secondary Malignancy_Brain, Other CNS and Intracranial", "definition": "At the specified date, a patient is defined as having had Secondary Malignancy Brain, Other CNS and Intracranial IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Secondary Malignancy Brain, Other CNS and Intracranial diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Secondary Malignancy Brain, Other CNS and Intracranial or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:11:33.343472Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:11:33.343499Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 1525, "concept_version_id": 4189, "concept_name": "Secondary Malignancy_Brain, Other CNS and Intracranial - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH293", "phenotype_version_id": 586, "phenotype_name": "Secondary Malignancy_Brain, Other CNS and Intracranial", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "B583.00", "description": "Secondary malignant neoplasm of brain and spinal cord", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Medcode": "33843.0", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } }, { "code": "B583000", "description": "Secondary malignant neoplasm of brain", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Medcode": "5198.0", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } }, { "code": "B583100", "description": "Secondary malignant neoplasm of spinal cord", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Medcode": "38918.0", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } }, { "code": "B583200", "description": "Cerebral metastasis", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Medcode": "5199.0", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } }, { "code": "B583z00", "description": "Secondary malignant neoplasm of brain or spinal cord NOS", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Medcode": "59375.0", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } } ] }, { "concept_id": 1526, "concept_version_id": 4191, "concept_name": "Secondary Malignancy_Brain, Other CNS and Intracranial - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH293", "phenotype_version_id": 586, "phenotype_name": "Secondary Malignancy_Brain, Other CNS and Intracranial", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "33843.0", "description": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "ReadcodeDescr": "Secondary malignant neoplasm of brain and spinal cord", "Readcode": "B583.00" } }, { "code": "38918.0", "description": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "ReadcodeDescr": "Secondary malignant neoplasm of spinal cord", "Readcode": "B583100" } }, { "code": "5198.0", "description": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "ReadcodeDescr": "Secondary malignant neoplasm of brain", "Readcode": "B583000" } }, { "code": "5199.0", "description": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "ReadcodeDescr": "Cerebral metastasis", "Readcode": "B583200" } }, { "code": "59375.0", "description": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "ReadcodeDescr": "Secondary malignant neoplasm of brain or spinal cord NOS", "Readcode": "B583z00" } } ] }, { "concept_id": 1527, "concept_version_id": 4193, "concept_name": "Secondary Malignancy_Brain, Other CNS and Intracranial - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH293", "phenotype_version_id": 586, "phenotype_name": "Secondary Malignancy_Brain, Other CNS and Intracranial", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "C79.3", "description": "Secondary malignant neoplasm of brain and cerebral meninges", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } }, { "code": "C79.4", "description": "Secondary malignant neoplasm of other and unspecified parts of nervous system", "attributes": { "Disease": "Secondary Malignancy_Brain, Other CNS and Intracranial", "Category": "Diagnosis of Secondary Malignancy_Brain, Other CNS and Intracranial" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/2p48-a196", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 586, "version_name": "Secondary Malignancy_Brain, Other CNS and Intracranial", "version_date": "2021-10-06T16:11:33.370422Z", "is_published": true, "is_latest": true } ] } ]