[
  {
    "phenotype_id": "PH294",
    "phenotype_version_id": 588,
    "name": "Secondary malignancy_Liver and intrahepatic bile duct",
    "definition": "At the specified date, a patient is defined as having had Secondary malignancy Liver and intrahepatic bile duct IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Secondary malignancy Liver and intrahepatic bile duct diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of Secondary malignancy Liver and intrahepatic bile duct or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:11:35.295950Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:11:35.295977Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Secondary-malignancy_Liver-and-intrahepatic-bile-duct---1e102600-17bc-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Secondary-malignancy_Liver-and-intrahepatic-bile-duct.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1528,
        "concept_version_id": 4195,
        "concept_name": "Secondary malignancy_Liver and intrahepatic bile duct - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH294",
        "phenotype_version_id": 588,
        "phenotype_name": "Secondary malignancy_Liver and intrahepatic bile duct",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "B153.00",
            "description": "Secondary malignant neoplasm of liver",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "Medcode": "36147.0",
              "Category": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct"
            }
          },
          {
            "code": "B577.00",
            "description": "Secondary malignant neoplasm of liver",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "Medcode": "15103.0",
              "Category": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct"
            }
          },
          {
            "code": "B577.11",
            "description": "Liver metastases",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "Medcode": "4403.0",
              "Category": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct"
            }
          }
        ]
      },
      {
        "concept_id": 1529,
        "concept_version_id": 4197,
        "concept_name": "Secondary malignancy_Liver and intrahepatic bile duct - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH294",
        "phenotype_version_id": 588,
        "phenotype_name": "Secondary malignancy_Liver and intrahepatic bile duct",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "15103.0",
            "description": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "ReadcodeDescr": "Secondary malignant neoplasm of liver",
              "Readcode": "B577.00"
            }
          },
          {
            "code": "36147.0",
            "description": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "ReadcodeDescr": "Secondary malignant neoplasm of liver",
              "Readcode": "B153.00"
            }
          },
          {
            "code": "4403.0",
            "description": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "ReadcodeDescr": "Liver metastases",
              "Readcode": "B577.11"
            }
          }
        ]
      },
      {
        "concept_id": 1530,
        "concept_version_id": 4199,
        "concept_name": "Secondary malignancy_Liver and intrahepatic bile duct - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH294",
        "phenotype_version_id": 588,
        "phenotype_name": "Secondary malignancy_Liver and intrahepatic bile duct",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "C78.7",
            "description": "Secondary malignant neoplasm of liver and intrahepatic bile duct",
            "attributes": {
              "Disease": "Secondary malignancy_Liver and intrahepatic bile duct",
              "Category": "Diagnosis of Secondary malignancy_Liver and intrahepatic bile duct"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/x692-mt74",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 588,
        "version_name": "Secondary malignancy_Liver and intrahepatic bile duct",
        "version_date": "2021-10-06T16:11:35.324134Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]