[
  {
    "phenotype_id": "PH301",
    "phenotype_version_id": 602,
    "name": "Septicaemia",
    "definition": "At the specified date, a patient is defined as having had 'Septicaemia' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nSecondary care\n\n\n1. ALL diagnoses of 'Septicaemia' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:11:49.562093Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:11:49.562121Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Septicaemia---0921f460-17be-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Septicaemia.cwl",
    "data_sources": [
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1549,
        "concept_version_id": 4237,
        "concept_name": "Septicaemia - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH301",
        "phenotype_version_id": 602,
        "phenotype_name": "Septicaemia",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "A02.1",
            "description": "Salmonella sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A20.7",
            "description": "Septicaemic plague",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A22.7",
            "description": "Anthrax sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A26.7",
            "description": "Erysipelothrix sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A32.7",
            "description": "Listerial sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A39.1",
            "description": "Waterhouse-Friderichsen syndrome",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A39.2",
            "description": "Acute meningococcaemia",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A39.3",
            "description": "Chronic meningococcaemia",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A39.4",
            "description": "Meningococcaemia, unspecified",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A40",
            "description": "Streptococcal sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A41",
            "description": "Other sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "A42.7",
            "description": "Actinomycotic sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "B37.7",
            "description": "Candidal sepsis",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          },
          {
            "code": "P36",
            "description": "Bacterial sepsis of newborn",
            "attributes": {
              "Disease": "Septicaemia",
              "Category": "Diagnosis of Septicaemia"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/5806-wz14",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 602,
        "version_name": "Septicaemia",
        "version_date": "2021-10-06T16:11:49.583791Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]