[
  {
    "phenotype_id": "PH305",
    "phenotype_version_id": 610,
    "name": "Sickle-cell trait",
    "definition": "At the specified date, a patient is defined as having had Sickle-cell trait IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. Sickle-cell trait diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of Sickle-cell trait or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:11:58.061199Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:11:58.061227Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Sickle-cell-trait---1e623640-17bf-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Sickle-cell-trait.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 1559,
        "concept_version_id": 4257,
        "concept_name": "Sickle-cell trait - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH305",
        "phenotype_version_id": 610,
        "phenotype_name": "Sickle-cell trait",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "677C600",
            "description": "Sickle cell gene carrier",
            "attributes": {
              "Disease": "Sickle-cell trait",
              "Medcode": "106623.0",
              "Category": "Diagnosis of Sickle-cell trait"
            }
          },
          {
            "code": "D105.00",
            "description": "Sickle-cell trait",
            "attributes": {
              "Disease": "Sickle-cell trait",
              "Medcode": "3616.0",
              "Category": "Diagnosis of Sickle-cell trait"
            }
          }
        ]
      },
      {
        "concept_id": 1560,
        "concept_version_id": 4259,
        "concept_name": "Sickle-cell trait - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH305",
        "phenotype_version_id": 610,
        "phenotype_name": "Sickle-cell trait",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "106623.0",
            "description": "Diagnosis of Sickle-cell trait",
            "attributes": {
              "Disease": "Sickle-cell trait",
              "ReadcodeDescr": "Sickle cell gene carrier",
              "Readcode": "677C600"
            }
          },
          {
            "code": "3616.0",
            "description": "Diagnosis of Sickle-cell trait",
            "attributes": {
              "Disease": "Sickle-cell trait",
              "ReadcodeDescr": "Sickle-cell trait",
              "Readcode": "D105.00"
            }
          }
        ]
      },
      {
        "concept_id": 1561,
        "concept_version_id": 4261,
        "concept_name": "Sickle-cell trait - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH305",
        "phenotype_version_id": 610,
        "phenotype_name": "Sickle-cell trait",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "D57.3",
            "description": "Sickle-cell trait",
            "attributes": {
              "Disease": "Sickle-cell trait",
              "Category": "Diagnosis of Sickle-cell trait"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/9q5h-ax87",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 610,
        "version_name": "Sickle-cell trait",
        "version_date": "2021-10-06T16:11:58.088047Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]