[ { "phenotype_id": "PH33", "phenotype_version_id": 66, "name": "Secondary polycythaemia", "definition": "At the specified date, a patient is defined as having had 'Secondary polycythaemia' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Secondary polycythaemia' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of 'Secondary polycythaemia' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:00:25.936988Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:00:25.937021Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Secondary-polycythaemia---7235aec0-1709-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Secondary-polycythaemia.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 780, "concept_version_id": 2699, "concept_name": "Secondary polycythaemia - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH33", "phenotype_version_id": 66, "phenotype_name": "Secondary polycythaemia", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "D410.00", "description": "Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "5086.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410000", "description": "Stress polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "15311.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410011", "description": "Spurious polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "17486.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410100", "description": "High altitude polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "37129.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410200", "description": "Polycythaemia due to cyanotic heart disease", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "17605.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410300", "description": "Polycythaemia due to cyanotic respiratory disease", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "44611.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410400", "description": "Renal polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "44894.0", "Category": "Diagnosis of Secondary polycythaemia" } }, { "code": "D410z00", "description": "Secondary polycythaemia NOS", "attributes": { "Disease": "Secondary polycythaemia", "Medcode": "15301.0", "Category": "Diagnosis of Secondary polycythaemia" } } ] }, { "concept_id": 781, "concept_version_id": 2701, "concept_name": "Secondary polycythaemia - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH33", "phenotype_version_id": 66, "phenotype_name": "Secondary polycythaemia", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "15301.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Secondary polycythaemia NOS", "Readcode": "D410z00" } }, { "code": "15311.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Stress polycythaemia", "Readcode": "D410000" } }, { "code": "17486.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Spurious polycythaemia", "Readcode": "D410011" } }, { "code": "17605.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Polycythaemia due to cyanotic heart disease", "Readcode": "D410200" } }, { "code": "37129.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "High altitude polycythaemia", "Readcode": "D410100" } }, { "code": "44611.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Polycythaemia due to cyanotic respiratory disease", "Readcode": "D410300" } }, { "code": "44894.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Renal polycythaemia", "Readcode": "D410400" } }, { "code": "5086.0", "description": "Diagnosis of Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "ReadcodeDescr": "Secondary polycythaemia", "Readcode": "D410.00" } } ] }, { "concept_id": 782, "concept_version_id": 2703, "concept_name": "Secondary polycythaemia - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH33", "phenotype_version_id": 66, "phenotype_name": "Secondary polycythaemia", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "D75.1", "description": "Secondary polycythaemia", "attributes": { "Disease": "Secondary polycythaemia", "Category": "Diagnosis of Secondary polycythaemia" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/g666-6s48", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 66, "version_name": "Secondary polycythaemia", "version_date": "2021-10-06T16:00:25.967456Z", "is_published": true, "is_latest": true } ] } ]