[
  {
    "phenotype_id": "PH4125",
    "phenotype_version_id": 9343,
    "name": "Benign neoplasm and polyp of uterus",
    "definition": "A female reproductive organ benign neoplasm that is located in the uterus.\n\nUKB baseline self reported fields.\n",
    "implementation": "The earliest record across all sources is obtained.\n",
    "publications": [
      {
        "doi": "https://doi.org/10.1038/s41598-025-05838-9",
        "details": "Torralbo, Ana and Davitte, Jonathan M. and Croteau-Chonka, Damien C. and Ytsma, Cai R. and Tomlinson, Christopher and Fitzpatrick, Natalie and Chung, Sheng-Chia and Fatemifar, Ghazaleh and Cortes, Adrian S. and Richardson, Tom G. and Barclay, Matthew and Carrasco Zanini Sanchez, Julia and Finan, Chris and Hemingway, Harry and Hingorani, Aroon D. and Kuan Po Ai, Valerie and Langenberg, Claudia and Lyratzopoulos, Georgios and Lumbers, Tom and Pietzner, Maik and Shah, Anoop Dinesh and Thygesen, Johan Hilge and Zelenka, Natalie and Whittaker, John C. and Ehm, Margaret G. and Denaxas, Spiros, A Computational Framework for Defining and Validating Reproducible Phenotyping Algorithms of 313 Diseases in the UK Biobank.",
        "primary": true
      }
    ],
    "validation": "Phenotypes underwent a multi\\-layered validation approach that included a) evaluating data source concordance, b) age\\-sex incidence and baseline prevalence patterns, c) an external comparison to a representative and unselected UK EHR dataset, d) modifiable risk factor associations, and e) genetic correlations with external genome\\-wide association studies (GWAS). Results showed consistent disease distributions by age and sex, high ranked correlation with general population prevalence estimates, confirmed risk factor associations, and significant genetic correlations with external GWAS.\n",
    "citation_requirements": null,
    "created": "2026-06-08T20:07:05.179827Z",
    "author": "Torralbo, A; Davitte, J M; Croteau-Chonka, D C; Ytsma, C; Tomlinson, C; Fitzpatrick, N K; Chung, S C; Fatemifar, G; Cortes, A S; Richardson, T G; Barclay, M; Carrasco Zanini, J; Finan, C; Hemingway, H; Hingorani, A; Kuan, V; Langenberg, C; Lyratzopoulos, G; Lumbers, R T; Pietzner, M; Shah, A D; Thygesen, J H; Zelenka, N; Whittaker, J C; Ehm, M G; Denaxas, S",
    "collections": [
      {
        "name": "Phenotype Library",
        "value": 18
      },
      {
        "name": "UK Biobank",
        "value": 32
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2026-06-08T20:07:05.172670Z",
    "sex": [
      {
        "name": "Female",
        "value": "2"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "trials": null,
    "ontology": [
      {
        "name": "Benign neoplasm of uterus (disorder)",
        "value": 424418
      }
    ],
    "phenoflowid": null,
    "data_sources": [
      {
        "name": "UK Biobank",
        "value": 13,
        "uid": "6a9f93ad-2434-41d9-93bf-6e9d2eee04e5",
        "url": "https://healthdatagateway.org/en/dataset/700",
        "datasource_id": 700
      },
      {
        "name": "Patient Episode Dataset for Wales (PEDW)",
        "value": 40,
        "uid": "4c33a5d2-164c-41d7-9797-dc2b008cc852",
        "url": "https://healthdatagateway.org/en/dataset/318",
        "datasource_id": 318
      },
      {
        "name": "Scottish Cancer Registry (SMR06)",
        "value": 417,
        "uid": "ad36dc03-1856-44de-99b0-1af6f312d86b",
        "url": "https://healthdatagateway.org/en/dataset/79",
        "datasource_id": 79
      },
      {
        "name": "Cancer Registration Data",
        "value": 788,
        "uid": "6904a2ff-ab44-4dd6-b9ec-25d3cad29e43",
        "url": "https://healthdatagateway.org/en/dataset/880",
        "datasource_id": 880
      }
    ],
    "endorsements": null,
    "project_name": null,
    "coding_system": [
      {
        "name": "UKBioBank codes",
        "value": 12
      },
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v3",
        "value": 6
      }
    ],
    "corresp_author": "Ana Torralbo",
    "event_date_range": null,
    "concept_information": [
      {
        "concept_id": 9764,
        "concept_version_id": 17249,
        "concept_name": "Non-cancer illness code, self-reported",
        "coding_system": {
          "id": 12,
          "name": "UKBioBank codes",
          "description": "UKBioBank codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "1352",
            "description": "uterine polyps",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9765,
        "concept_version_id": 17250,
        "concept_name": "Diagnoses - main ICD10",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "D26.1",
            "description": "Other benign neoplasm: Corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.7",
            "description": "Other benign neoplasm: Other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.9",
            "description": "Other benign neoplasm: Uterus, unspecified",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "N84.0",
            "description": "Polyp of corpus uteri",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9766,
        "concept_version_id": 17251,
        "concept_name": "Diagnoses - secondary ICD10",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "D26.1",
            "description": "Other benign neoplasm: Corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.7",
            "description": "Other benign neoplasm: Other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.9",
            "description": "Other benign neoplasm: Uterus, unspecified",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "N84.0",
            "description": "Polyp of corpus uteri",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9767,
        "concept_version_id": 17252,
        "concept_name": "Underlying (primary) cause of death: ICD10",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "D26.1",
            "description": "Other benign neoplasm: Corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.7",
            "description": "Other benign neoplasm: Other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.9",
            "description": "Other benign neoplasm: Uterus, unspecified",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "N84.0",
            "description": "Polyp of corpus uteri",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9768,
        "concept_version_id": 17253,
        "concept_name": "Contributory (secondary) causes of death: ICD10",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "D26.1",
            "description": "Other benign neoplasm: Corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.7",
            "description": "Other benign neoplasm: Other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.9",
            "description": "Other benign neoplasm: Uterus, unspecified",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "N84.0",
            "description": "Polyp of corpus uteri",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9769,
        "concept_version_id": 17254,
        "concept_name": "GP clinical event records",
        "coding_system": {
          "id": 6,
          "name": "Read codes v3",
          "description": "Read codes v3"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "7E0D311",
            "description": "Endoscopic endometrial polypectomy",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "7E0D700",
            "description": "Endoscopic endometrial polypectomy",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B79..00",
            "description": "Other benign neoplasm of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B791.00",
            "description": "Benign neoplasm corpus uteri NEC",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B791000",
            "description": "Benign neoplasm of endometrium NEC",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B791100",
            "description": "Benign neoplasm of myometrium NEC",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B791200",
            "description": "Benign neoplasm of uterine fundus NEC",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B791z00",
            "description": "Benign neoplasm of corpus uteri NOS",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B79y.00",
            "description": "Benign neoplasm of other specified sites of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "B79z.00",
            "description": "Benign neoplasm of uterus NOS",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "ByuGB00",
            "description": "[X]Benign neoplasm of other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "K540.00",
            "description": "Polyp of the corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "K540.11",
            "description": "Endometrial polyp",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "XE06m",
            "description": "Endoscopic destruction of lesion of uterus NEC",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "XM1Ha",
            "description": "Endoscopic endometrial polypectomy",
            "attributes": {
              "type": "any"
            }
          }
        ]
      },
      {
        "concept_id": 9770,
        "concept_version_id": 17255,
        "concept_name": "Type of cancer: ICD10",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH4125",
        "phenotype_version_id": 9343,
        "phenotype_name": "Benign neoplasm and polyp of uterus",
        "code_attribute_header": [
          "type"
        ],
        "codes": [
          {
            "code": "D26.1",
            "description": "Other benign neoplasm: Corpus uteri",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.7",
            "description": "Other benign neoplasm: Other parts of uterus",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "D26.9",
            "description": "Other benign neoplasm: Uterus, unspecified",
            "attributes": {
              "type": "any"
            }
          },
          {
            "code": "N84.0",
            "description": "Polyp of corpus uteri",
            "attributes": {
              "type": "any"
            }
          }
        ]
      }
    ],
    "status": 1,
    "doi": "https://doi.org/10.48533/n71v-5148",
    "is_deleted": false,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 2,
      "name": "BHF Data Science Centre Phenotype",
      "description": "BHF Data Science Centre Phenotype definitions that describe a list of clinical codes, algorithms using clinical codes, or set of clinical trials. Visit the BHF Data Science Centre website to learn more: https://bhfdatasciencecentre.org",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 9343,
        "version_name": "Benign neoplasm and polyp of uterus",
        "version_date": "2026-06-08T20:07:05.190507Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]