[ { "phenotype_id": "PH4305", "phenotype_version_id": 9523, "name": "Primary Malignancy_Oro-pharyngeal", "definition": "Malignant neoplasm of lip, oral cavity and pharynx.\n\nUKB baseline self reported fields.\n", "implementation": "The earliest record across all sources is obtained.\n", "publications": [ { "doi": "https://doi.org/10.1038/s41598-025-05838-9", "details": "Torralbo, Ana and Davitte, Jonathan M. and Croteau-Chonka, Damien C. and Ytsma, Cai R. and Tomlinson, Christopher and Fitzpatrick, Natalie and Chung, Sheng-Chia and Fatemifar, Ghazaleh and Cortes, Adrian S. and Richardson, Tom G. and Barclay, Matthew and Carrasco Zanini Sanchez, Julia and Finan, Chris and Hemingway, Harry and Hingorani, Aroon D. and Kuan Po Ai, Valerie and Langenberg, Claudia and Lyratzopoulos, Georgios and Lumbers, Tom and Pietzner, Maik and Shah, Anoop Dinesh and Thygesen, Johan Hilge and Zelenka, Natalie and Whittaker, John C. and Ehm, Margaret G. and Denaxas, Spiros, A Computational Framework for Defining and Validating Reproducible Phenotyping Algorithms of 313 Diseases in the UK Biobank.", "primary": true } ], "validation": "Phenotypes underwent a multi\\-layered validation approach that included a) evaluating data source concordance, b) age\\-sex incidence and baseline prevalence patterns, c) an external comparison to a representative and unselected UK EHR dataset, d) modifiable risk factor associations, and e) genetic correlations with external genome\\-wide association studies (GWAS). Results showed consistent disease distributions by age and sex, high ranked correlation with general population prevalence estimates, confirmed risk factor associations, and significant genetic correlations with external GWAS.\n", "citation_requirements": null, "created": "2026-06-08T20:16:41.013151Z", "author": "Torralbo, A; Davitte, J M; Croteau-Chonka, D C; Ytsma, C; Tomlinson, C; Fitzpatrick, N K; Chung, S C; Fatemifar, G; Cortes, A S; Richardson, T G; Barclay, M; Carrasco Zanini, J; Finan, C; Hemingway, H; Hingorani, A; Kuan, V; Langenberg, C; Lyratzopoulos, G; Lumbers, R T; Pietzner, M; Shah, A D; Thygesen, J H; Zelenka, N; Whittaker, J C; Ehm, M G; Denaxas, S", "collections": [ { "name": "Phenotype Library", "value": 18 }, { "name": "UK Biobank", "value": 32 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2026-06-08T20:16:41.006851Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "trials": null, "ontology": [ { "name": "Malignant neoplasm of pharynx (disorder)", "value": 626133 } ], "phenoflowid": null, "data_sources": [ { "name": "UK Biobank", "value": 13, "uid": "6a9f93ad-2434-41d9-93bf-6e9d2eee04e5", "url": "https://healthdatagateway.org/en/dataset/700", "datasource_id": 700 }, { "name": "Patient Episode Dataset for Wales (PEDW)", "value": 40, "uid": "4c33a5d2-164c-41d7-9797-dc2b008cc852", "url": "https://healthdatagateway.org/en/dataset/318", "datasource_id": 318 }, { "name": "Scottish Cancer Registry (SMR06)", "value": 417, "uid": "ad36dc03-1856-44de-99b0-1af6f312d86b", "url": "https://healthdatagateway.org/en/dataset/79", "datasource_id": 79 }, { "name": "Cancer Registration Data", "value": 788, "uid": "6904a2ff-ab44-4dd6-b9ec-25d3cad29e43", "url": "https://healthdatagateway.org/en/dataset/880", "datasource_id": 880 } ], "endorsements": null, "project_name": null, "coding_system": [ { "name": "UKBioBank codes", "value": 12 }, { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v3", "value": 6 } ], "corresp_author": "Ana Torralbo", "event_date_range": null, "concept_information": [ { "concept_id": 10879, "concept_version_id": 18364, "concept_name": "Cancer code, self-reported", "coding_system": { "id": 12, "name": "UKBioBank codes", "description": "UKBioBank codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "1004", "description": "cancer of lip/mouth/pharynx/oral cavity", "attributes": { "type": "any" } }, { "code": "1006", "description": "larynx/throat cancer", "attributes": { "type": "any" } }, { "code": "1010", "description": "lip cancer", "attributes": { "type": "any" } }, { "code": "1011", "description": "tongue cancer", "attributes": { "type": "any" } }, { "code": "1012", "description": "gum cancer", "attributes": { "type": "any" } }, { "code": "1015", "description": "parotid gland cancer", "attributes": { "type": "any" } }, { "code": "1016", "description": "other salivary gland cancer", "attributes": { "type": "any" } }, { "code": "1077", "description": "mouth cancer", "attributes": { "type": "any" } }, { "code": "1078", "description": "tonsil cancer", "attributes": { "type": "any" } }, { "code": "1079", "description": "oropharynx / oropharyngeal cancer", "attributes": { "type": "any" } } ] }, { "concept_id": 10880, "concept_version_id": 18365, "concept_name": "Diagnoses - main ICD10", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "C00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "C01", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "C02", "description": "Malignant neoplasm of other and unspecified parts of tongue", "attributes": { "type": "any" } }, { "code": "C03", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "C04", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "C05", "description": "Malignant neoplasm of palate", "attributes": { "type": "any" } }, { "code": "C06", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "C07", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "C08", "description": "Malignant neoplasm of other and unspecified major salivary glands", "attributes": { "type": "any" } }, { "code": "C09", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "C10", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "C11", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "C12", "description": "Malignant neoplasm of piriform sinus", "attributes": { "type": "any" } }, { "code": "C13", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "C14", "description": "Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx", "attributes": { "type": "any" } } ] }, { "concept_id": 10881, "concept_version_id": 18366, "concept_name": "Diagnoses - secondary ICD10", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "C00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "C01", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "C02", "description": "Malignant neoplasm of other and unspecified parts of tongue", "attributes": { "type": "any" } }, { "code": "C03", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "C04", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "C05", "description": "Malignant neoplasm of palate", "attributes": { "type": "any" } }, { "code": "C06", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "C07", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "C08", "description": "Malignant neoplasm of other and unspecified major salivary glands", "attributes": { "type": "any" } }, { "code": "C09", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "C10", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "C11", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "C12", "description": "Malignant neoplasm of piriform sinus", "attributes": { "type": "any" } }, { "code": "C13", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "C14", "description": "Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx", "attributes": { "type": "any" } } ] }, { "concept_id": 10882, "concept_version_id": 18367, "concept_name": "Underlying (primary) cause of death: ICD10", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "C00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "C01", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "C02", "description": "Malignant neoplasm of other and unspecified parts of tongue", "attributes": { "type": "any" } }, { "code": "C03", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "C04", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "C05", "description": "Malignant neoplasm of palate", "attributes": { "type": "any" } }, { "code": "C06", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "C07", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "C08", "description": "Malignant neoplasm of other and unspecified major salivary glands", "attributes": { "type": "any" } }, { "code": "C09", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "C10", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "C11", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "C12", "description": "Malignant neoplasm of piriform sinus", "attributes": { "type": "any" } }, { "code": "C13", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "C14", "description": "Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx", "attributes": { "type": "any" } } ] }, { "concept_id": 10883, "concept_version_id": 18368, "concept_name": "Contributory (secondary) causes of death: ICD10", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "C00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "C01", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "C02", "description": "Malignant neoplasm of other and unspecified parts of tongue", "attributes": { "type": "any" } }, { "code": "C03", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "C04", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "C05", "description": "Malignant neoplasm of palate", "attributes": { "type": "any" } }, { "code": "C06", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "C07", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "C08", "description": "Malignant neoplasm of other and unspecified major salivary glands", "attributes": { "type": "any" } }, { "code": "C09", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "C10", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "C11", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "C12", "description": "Malignant neoplasm of piriform sinus", "attributes": { "type": "any" } }, { "code": "C13", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "C14", "description": "Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx", "attributes": { "type": "any" } } ] }, { "concept_id": 10884, "concept_version_id": 18369, "concept_name": "GP clinical event records", "coding_system": { "id": 6, "name": "Read codes v3", "description": "Read codes v3" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "B0...00", "description": "Malignant neoplasm of lip, oral cavity and pharynx", "attributes": { "type": "any" } }, { "code": "B00..00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "B000.00", "description": "Malignant neoplasm of upper lip, vermilion border", "attributes": { "type": "any" } }, { "code": "B000000", "description": "Malignant neoplasm of upper lip, external", "attributes": { "type": "any" } }, { "code": "B000100", "description": "Malignant neoplasm of upper lip, lipstick area", "attributes": { "type": "any" } }, { "code": "B000z00", "description": "Malignant neoplasm of upper lip, vermilion border NOS", "attributes": { "type": "any" } }, { "code": "B001.00", "description": "Malignant neoplasm of lower lip, vermilion border", "attributes": { "type": "any" } }, { "code": "B001000", "description": "Malignant neoplasm of lower lip, external", "attributes": { "type": "any" } }, { "code": "B00..11", "description": "Carcinoma of lip", "attributes": { "type": "any" } }, { "code": "B001100", "description": "Malignant neoplasm of lower lip, lipstick area", "attributes": { "type": "any" } }, { "code": "B001z00", "description": "Malignant neoplasm of lower lip, vermilion border NOS", "attributes": { "type": "any" } }, { "code": "B002.00", "description": "Malignant neoplasm of upper lip, inner aspect", "attributes": { "type": "any" } }, { "code": "B002100", "description": "Malignant neoplasm of upper lip, frenulum", "attributes": { "type": "any" } }, { "code": "B002200", "description": "Malignant neoplasm of upper lip, mucosa", "attributes": { "type": "any" } }, { "code": "B002300", "description": "Malignant neoplasm of upper lip, oral aspect", "attributes": { "type": "any" } }, { "code": "B002z00", "description": "Malignant neoplasm of upper lip, inner aspect NOS", "attributes": { "type": "any" } }, { "code": "B003.00", "description": "Malignant neoplasm of lower lip, inner aspect", "attributes": { "type": "any" } }, { "code": "B003000", "description": "Malignant neoplasm of lower lip, buccal aspect", "attributes": { "type": "any" } }, { "code": "B003100", "description": "Malignant neoplasm of lower lip, frenulum", "attributes": { "type": "any" } }, { "code": "B003200", "description": "Malignant neoplasm of lower lip, mucosa", "attributes": { "type": "any" } }, { "code": "B003300", "description": "Malignant neoplasm of lower lip, oral aspect", "attributes": { "type": "any" } }, { "code": "B003z00", "description": "Malignant neoplasm of lower lip, inner aspect NOS", "attributes": { "type": "any" } }, { "code": "B004.00", "description": "Malignant neoplasm of lip unspecified, inner aspect", "attributes": { "type": "any" } }, { "code": "B004000", "description": "Malignant neoplasm of lip unspecified, buccal aspect", "attributes": { "type": "any" } }, { "code": "B004200", "description": "Malignant neoplasm of lip unspecified, mucosa", "attributes": { "type": "any" } }, { "code": "B004300", "description": "Malignant neoplasm of lip, oral aspect", "attributes": { "type": "any" } }, { "code": "B005.00", "description": "Malignant neoplasm of commissure of lip", "attributes": { "type": "any" } }, { "code": "B006.00", "description": "Malignant neoplasm of overlapping lesion of lip", "attributes": { "type": "any" } }, { "code": "B007.00", "description": "Malignant neoplasm of lip, unspecified", "attributes": { "type": "any" } }, { "code": "B00z000", "description": "Malignant neoplasm of lip, unspecified, external", "attributes": { "type": "any" } }, { "code": "B00z100", "description": "Malignant neoplasm of lip, unspecified, lipstick area", "attributes": { "type": "any" } }, { "code": "B00zz00", "description": "Malignant neoplasm of lip, vermilion border NOS", "attributes": { "type": "any" } }, { "code": "B01..00", "description": "Malignant neoplasm of tongue", "attributes": { "type": "any" } }, { "code": "B010.00", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "B010000", "description": "Malignant neoplasm of base of tongue dorsal surface", "attributes": { "type": "any" } }, { "code": "B010.11", "description": "Malignant neoplasm of posterior third of tongue", "attributes": { "type": "any" } }, { "code": "B010z00", "description": "Malignant neoplasm of fixed part of tongue NOS", "attributes": { "type": "any" } }, { "code": "B0...11", "description": "Carcinoma of lip, oral cavity and pharynx", "attributes": { "type": "any" } }, { "code": "B011.00", "description": "Malignant neoplasm of dorsal surface of tongue", "attributes": { "type": "any" } }, { "code": "B011100", "description": "Malignant neoplasm of midline of tongue", "attributes": { "type": "any" } }, { "code": "B011z00", "description": "Malignant neoplasm of dorsum of tongue NOS", "attributes": { "type": "any" } }, { "code": "B012.00", "description": "Malignant neoplasm of tongue, tip and lateral border", "attributes": { "type": "any" } }, { "code": "B013.00", "description": "Malignant neoplasm of ventral surface of tongue", "attributes": { "type": "any" } }, { "code": "B013000", "description": "Malignant neoplasm of anterior 2/3 of tongue ventral surface", "attributes": { "type": "any" } }, { "code": "B013100", "description": "Malignant neoplasm of frenulum linguae", "attributes": { "type": "any" } }, { "code": "B013z00", "description": "Malignant neoplasm of ventral tongue surface NOS", "attributes": { "type": "any" } }, { "code": "B014.00", "description": "Malignant neoplasm of anterior 2/3 of tongue unspecified", "attributes": { "type": "any" } }, { "code": "B015.00", "description": "Malignant neoplasm of tongue, junctional zone", "attributes": { "type": "any" } }, { "code": "B016.00", "description": "Malignant neoplasm of lingual tonsil", "attributes": { "type": "any" } }, { "code": "B017.00", "description": "Malignant overlapping lesion of tongue", "attributes": { "type": "any" } }, { "code": "B01y.00", "description": "Malignant neoplasm of other sites of tongue", "attributes": { "type": "any" } }, { "code": "B01z.00", "description": "Malignant neoplasm of tongue NOS", "attributes": { "type": "any" } }, { "code": "B02..00", "description": "Malignant neoplasm of major salivary glands", "attributes": { "type": "any" } }, { "code": "B020.00", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "B021.00", "description": "Malignant neoplasm of submandibular gland", "attributes": { "type": "any" } }, { "code": "B022.00", "description": "Malignant neoplasm of sublingual gland", "attributes": { "type": "any" } }, { "code": "B02y.00", "description": "Malignant neoplasm of other major salivary glands", "attributes": { "type": "any" } }, { "code": "B02z.00", "description": "Malignant neoplasm of major salivary gland NOS", "attributes": { "type": "any" } }, { "code": "B03..00", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "B030.00", "description": "Malignant neoplasm of upper gum", "attributes": { "type": "any" } }, { "code": "B031.00", "description": "Malignant neoplasm of lower gum", "attributes": { "type": "any" } }, { "code": "B03y.00", "description": "Malignant neoplasm of other sites of gum", "attributes": { "type": "any" } }, { "code": "B03z.00", "description": "Malignant neoplasm of gum NOS", "attributes": { "type": "any" } }, { "code": "B04..00", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "B040.00", "description": "Malignant neoplasm of anterior portion of floor of mouth", "attributes": { "type": "any" } }, { "code": "B041.00", "description": "Malignant neoplasm of lateral portion of floor of mouth", "attributes": { "type": "any" } }, { "code": "B042.00", "description": "Malignant neoplasm, overlapping lesion of floor of mouth", "attributes": { "type": "any" } }, { "code": "B04y.00", "description": "Malignant neoplasm of other sites of floor of mouth", "attributes": { "type": "any" } }, { "code": "B04z.00", "description": "Malignant neoplasm of floor of mouth NOS", "attributes": { "type": "any" } }, { "code": "B05..00", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "B050.00", "description": "Malignant neoplasm of cheek mucosa", "attributes": { "type": "any" } }, { "code": "B050.11", "description": "Malignant neoplasm of buccal mucosa", "attributes": { "type": "any" } }, { "code": "B051.00", "description": "Malignant neoplasm of vestibule of mouth", "attributes": { "type": "any" } }, { "code": "B051000", "description": "Malignant neoplasm of upper buccal sulcus", "attributes": { "type": "any" } }, { "code": "B051100", "description": "Malignant neoplasm of lower buccal sulcus", "attributes": { "type": "any" } }, { "code": "B052.00", "description": "Malignant neoplasm of hard palate", "attributes": { "type": "any" } }, { "code": "B053.00", "description": "Malignant neoplasm of soft palate", "attributes": { "type": "any" } }, { "code": "B054.00", "description": "Malignant neoplasm of uvula", "attributes": { "type": "any" } }, { "code": "B055.00", "description": "Malignant neoplasm of palate unspecified", "attributes": { "type": "any" } }, { "code": "B055000", "description": "Malignant neoplasm of junction of hard and soft palate", "attributes": { "type": "any" } }, { "code": "B055100", "description": "Malignant neoplasm of roof of mouth", "attributes": { "type": "any" } }, { "code": "B055z00", "description": "Malignant neoplasm of palate NOS", "attributes": { "type": "any" } }, { "code": "B056.00", "description": "Malignant neoplasm of retromolar area", "attributes": { "type": "any" } }, { "code": "B05y.00", "description": "Malignant neoplasm of other specified mouth parts", "attributes": { "type": "any" } }, { "code": "B05z.00", "description": "Malignant neoplasm of mouth NOS", "attributes": { "type": "any" } }, { "code": "B06..00", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "B060.00", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "B060000", "description": "Malignant neoplasm of faucial tonsil", "attributes": { "type": "any" } }, { "code": "B060100", "description": "Malignant neoplasm of palatine tonsil", "attributes": { "type": "any" } }, { "code": "B060200", "description": "Malignant neoplasm of overlapping lesion of tonsil", "attributes": { "type": "any" } }, { "code": "B060z00", "description": "Malignant neoplasm tonsil NOS", "attributes": { "type": "any" } }, { "code": "B061.00", "description": "Malignant neoplasm of tonsillar fossa", "attributes": { "type": "any" } }, { "code": "B062.00", "description": "Malignant neoplasm of tonsillar pillar", "attributes": { "type": "any" } }, { "code": "B062000", "description": "Malignant neoplasm of faucial pillar", "attributes": { "type": "any" } }, { "code": "B062100", "description": "Malignant neoplasm of glossopalatine fold", "attributes": { "type": "any" } }, { "code": "B062200", "description": "Malignant neoplasm of palatoglossal arch", "attributes": { "type": "any" } }, { "code": "B062300", "description": "Malignant neoplasm of palatopharyngeal arch", "attributes": { "type": "any" } }, { "code": "B062z00", "description": "Malignant neoplasm of tonsillar fossa NOS", "attributes": { "type": "any" } }, { "code": "B063.00", "description": "Malignant neoplasm of vallecula", "attributes": { "type": "any" } }, { "code": "B064.00", "description": "Malignant neoplasm of anterior epiglottis", "attributes": { "type": "any" } }, { "code": "B064000", "description": "Malignant neoplasm of epiglottis, free border", "attributes": { "type": "any" } }, { "code": "B064100", "description": "Malignant neoplasm of glossoepiglottic fold", "attributes": { "type": "any" } }, { "code": "B064z00", "description": "Malignant neoplasm of anterior epiglottis NOS", "attributes": { "type": "any" } }, { "code": "B065.00", "description": "Malignant neoplasm of junctional region of epiglottis", "attributes": { "type": "any" } }, { "code": "B066.00", "description": "Malignant neoplasm of lateral wall of oropharynx", "attributes": { "type": "any" } }, { "code": "B067.00", "description": "Malignant neoplasm of posterior wall of oropharynx", "attributes": { "type": "any" } }, { "code": "B06y.00", "description": "Malignant neoplasm of oropharynx, other specified sites", "attributes": { "type": "any" } }, { "code": "B06yz00", "description": "Malignant neoplasm of other specified site of oropharynx NOS", "attributes": { "type": "any" } }, { "code": "B06z.00", "description": "Malignant neoplasm of oropharynx NOS", "attributes": { "type": "any" } }, { "code": "B07..00", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "B070.00", "description": "Malignant neoplasm of roof of nasopharynx", "attributes": { "type": "any" } }, { "code": "B071.00", "description": "Malignant neoplasm of posterior wall of nasopharynx", "attributes": { "type": "any" } }, { "code": "B071000", "description": "Malignant neoplasm of adenoid", "attributes": { "type": "any" } }, { "code": "B071100", "description": "Malignant neoplasm of pharyngeal tonsil", "attributes": { "type": "any" } }, { "code": "B071z00", "description": "Malignant neoplasm of posterior wall of nasopharynx NOS", "attributes": { "type": "any" } }, { "code": "B072.00", "description": "Malignant neoplasm of lateral wall of nasopharynx", "attributes": { "type": "any" } }, { "code": "B072000", "description": "Malignant neoplasm of pharyngeal recess", "attributes": { "type": "any" } }, { "code": "B072z00", "description": "Malignant neoplasm of lateral wall of nasopharynx NOS", "attributes": { "type": "any" } }, { "code": "B073.00", "description": "Malignant neoplasm of anterior wall of nasopharynx", "attributes": { "type": "any" } }, { "code": "B073100", "description": "Malignant neoplasm of nasopharyngeal soft palate surface", "attributes": { "type": "any" } }, { "code": "B073200", "description": "Malignant neoplasm posterior margin nasal septum and choanae", "attributes": { "type": "any" } }, { "code": "B073z00", "description": "Malignant neoplasm of anterior wall of nasopharynx NOS", "attributes": { "type": "any" } }, { "code": "B074.00", "description": "Malignant neoplasm, overlapping lesion of nasopharynx", "attributes": { "type": "any" } }, { "code": "B07y.00", "description": "Malignant neoplasm of other specified site of nasopharynx", "attributes": { "type": "any" } }, { "code": "B07z.00", "description": "Malignant neoplasm of nasopharynx NOS", "attributes": { "type": "any" } }, { "code": "B08..00", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "B080.00", "description": "Malignant neoplasm of postcricoid region", "attributes": { "type": "any" } }, { "code": "B081.00", "description": "Malignant neoplasm of pyriform sinus", "attributes": { "type": "any" } }, { "code": "B082.00", "description": "Malignant neoplasm aryepiglottic fold, hypopharyngeal aspect", "attributes": { "type": "any" } }, { "code": "B083.00", "description": "Malignant neoplasm of posterior pharynx", "attributes": { "type": "any" } }, { "code": "B08y.00", "description": "Malignant neoplasm of other specified hypopharyngeal site", "attributes": { "type": "any" } }, { "code": "B08z.00", "description": "Malignant neoplasm of hypopharynx NOS", "attributes": { "type": "any" } }, { "code": "B0z..00", "description": "Malig neop other/ill-defined sites lip, oral cavity, pharynx", "attributes": { "type": "any" } }, { "code": "B0z0.00", "description": "Malignant neoplasm of pharynx unspecified", "attributes": { "type": "any" } }, { "code": "B0z1.00", "description": "Malignant neoplasm of Waldeyer's ring", "attributes": { "type": "any" } }, { "code": "B0z2.00", "description": "Malignant neoplasm of laryngopharynx", "attributes": { "type": "any" } }, { "code": "B0zy.00", "description": "Malignant neoplasm of other sites lip, oral cavity, pharynx", "attributes": { "type": "any" } }, { "code": "B0zz.00", "description": "Malignant neoplasm of lip, oral cavity and pharynx NOS", "attributes": { "type": "any" } }, { "code": "BB5y000", "description": "[M]Basal cell adenocarcinoma", "attributes": { "type": "any" } }, { "code": "Byu0.00", "description": "[X]Malignant neoplasm of lip, oral cavity and pharynx", "attributes": { "type": "any" } }, { "code": "XaC2J", "description": "Malignant neoplasm of lip, unspecified", "attributes": { "type": "any" } }, { "code": "XE2rk", "description": "Malignant neoplasm of lip, oral cavity and pharynx", "attributes": { "type": "any" } }, { "code": "ZV10019", "description": "[V]Personal history of malignant neoplasm of tongue", "attributes": { "type": "prevalent" } }, { "code": "ZV10y16", "description": "[V]Personal history of malignant neoplasm of tongue", "attributes": { "type": "prevalent" } } ] }, { "concept_id": 10885, "concept_version_id": 18370, "concept_name": "Type of cancer: ICD10", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH4305", "phenotype_version_id": 9523, "phenotype_name": "Primary Malignancy_Oro-pharyngeal", "code_attribute_header": [ "type" ], "codes": [ { "code": "C00", "description": "Malignant neoplasm of lip", "attributes": { "type": "any" } }, { "code": "C01", "description": "Malignant neoplasm of base of tongue", "attributes": { "type": "any" } }, { "code": "C02", "description": "Malignant neoplasm of other and unspecified parts of tongue", "attributes": { "type": "any" } }, { "code": "C03", "description": "Malignant neoplasm of gum", "attributes": { "type": "any" } }, { "code": "C04", "description": "Malignant neoplasm of floor of mouth", "attributes": { "type": "any" } }, { "code": "C05", "description": "Malignant neoplasm of palate", "attributes": { "type": "any" } }, { "code": "C06", "description": "Malignant neoplasm of other and unspecified parts of mouth", "attributes": { "type": "any" } }, { "code": "C07", "description": "Malignant neoplasm of parotid gland", "attributes": { "type": "any" } }, { "code": "C08", "description": "Malignant neoplasm of other and unspecified major salivary glands", "attributes": { "type": "any" } }, { "code": "C09", "description": "Malignant neoplasm of tonsil", "attributes": { "type": "any" } }, { "code": "C10", "description": "Malignant neoplasm of oropharynx", "attributes": { "type": "any" } }, { "code": "C11", "description": "Malignant neoplasm of nasopharynx", "attributes": { "type": "any" } }, { "code": "C12", "description": "Malignant neoplasm of piriform sinus", "attributes": { "type": "any" } }, { "code": "C13", "description": "Malignant neoplasm of hypopharynx", "attributes": { "type": "any" } }, { "code": "C14", "description": "Malignant neoplasm of other and ill-defined sites in the lip, oral cavity and pharynx", "attributes": { "type": "any" } } ] } ], "status": 1, "doi": "https://doi.org/10.48533/46xs-af17", "is_deleted": false, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 2, "name": "BHF Data Science Centre Phenotype", "description": "BHF Data Science Centre Phenotype definitions that describe a list of clinical codes, algorithms using clinical codes, or set of clinical trials. Visit the BHF Data Science Centre website to learn more: https://bhfdatasciencecentre.org", "version_id": 1 }, "versions": [ { "version_id": 9523, "version_name": "Primary Malignancy_Oro-pharyngeal", "version_date": "2026-06-08T20:16:41.018565Z", "is_published": true, "is_latest": true } ] } ]