[
  {
    "phenotype_id": "PH60",
    "phenotype_version_id": 120,
    "name": "Myelodysplastic syndromes",
    "definition": "At the specified date, a patient is defined as having had 'Myelodysplastic syndromes' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Myelodysplastic syndromes' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of 'Myelodysplastic syndromes' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": "10.1016/S2589-7500(19)30012-3",
        "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3"
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:01:23.935846Z",
    "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A",
    "collections": [
      {
        "name": "CALIBER",
        "value": 21
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:01:23.935875Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Myelodysplastic-syndromes---6c797890-174f-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Myelodysplastic-syndromes.cwl",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      },
      {
        "name": "HES Admitted Patient Care data for CPRD GOLD",
        "value": 9,
        "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43",
        "url": "https://healthdatagateway.org/en/dataset/674",
        "datasource_id": 674
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "Med codes",
        "value": 8
      }
    ],
    "event_date_range": "01/01/1999 - 01/07/2016",
    "concept_information": [
      {
        "concept_id": 846,
        "concept_version_id": 2831,
        "concept_name": "Myelodysplastic syndromes - Primary care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH60",
        "phenotype_version_id": 120,
        "phenotype_name": "Myelodysplastic syndromes",
        "code_attribute_header": [
          "Disease",
          "Medcode",
          "Category"
        ],
        "codes": [
          {
            "code": "7Q09700",
            "description": "Myelodysplastic syndrome drugs Band 1",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "102712.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937000",
            "description": "Refractory anaemia without sideroblasts, so stated",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "22890.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937100",
            "description": "Refractory anaemia with sideroblasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "10817.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937.14",
            "description": "Myelodysplasia",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "14927.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937200",
            "description": "Refractory anaemia with excess of blasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "23875.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937300",
            "description": "Refractory anaemia with excess of blasts with transformation",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "44420.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937600",
            "description": "Refractory anaemia without ring sideroblasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "105985.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937700",
            "description": "Refractory anaemia with ring sideroblasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "106993.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937800",
            "description": "Refractory anaemia with multilineage dysplasia",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "104740.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937900",
            "description": "5Q minus syndrome",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "105915.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937911",
            "description": "Myelodysplastic syndrome isolated del(5q) chromosomal abnorm",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "105390.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937W00",
            "description": "Myelodysplastic syndrome, unspecified",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "45285.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937W11",
            "description": "Myelodysplasia",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "4561.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "B937X00",
            "description": "Refractory anaemia, unspecified",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "19130.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "BBmA.00",
            "description": "[M] Refractory anaemia with sideroblasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "56756.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "BBmB.00",
            "description": "[M]Refractory anaemia+excess of blasts with transformation",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "60186.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "BBmL.00",
            "description": "[M] Refractory anaemia with excess of blasts",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "94921.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "BBv..00",
            "description": "[M]Myelodysplastic syndrome",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "7799.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "ByuHD00",
            "description": "[X]Myelodysplastic syndrome, unspecified",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "45143.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          },
          {
            "code": "D213.00",
            "description": "Refractory Anaemia",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Medcode": "16052.0",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          }
        ]
      },
      {
        "concept_id": 847,
        "concept_version_id": 2833,
        "concept_name": "Myelodysplastic syndromes - Primary care",
        "coding_system": {
          "id": 8,
          "name": "Med codes",
          "description": "Med codes"
        },
        "phenotype_id": "PH60",
        "phenotype_version_id": 120,
        "phenotype_name": "Myelodysplastic syndromes",
        "code_attribute_header": [
          "Disease",
          "ReadcodeDescr",
          "Readcode"
        ],
        "codes": [
          {
            "code": "102712.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Myelodysplastic syndrome drugs Band 1",
              "Readcode": "7Q09700"
            }
          },
          {
            "code": "104740.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia with multilineage dysplasia",
              "Readcode": "B937800"
            }
          },
          {
            "code": "105390.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Myelodysplastic syndrome isolated del(5q) chromosomal abnorm",
              "Readcode": "B937911"
            }
          },
          {
            "code": "105915.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "5Q minus syndrome",
              "Readcode": "B937900"
            }
          },
          {
            "code": "105985.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia without ring sideroblasts",
              "Readcode": "B937600"
            }
          },
          {
            "code": "106993.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia with ring sideroblasts",
              "Readcode": "B937700"
            }
          },
          {
            "code": "10817.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia with sideroblasts",
              "Readcode": "B937100"
            }
          },
          {
            "code": "14927.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Myelodysplasia",
              "Readcode": "B937.14"
            }
          },
          {
            "code": "16052.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory Anaemia",
              "Readcode": "D213.00"
            }
          },
          {
            "code": "19130.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia, unspecified",
              "Readcode": "B937X00"
            }
          },
          {
            "code": "22890.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia without sideroblasts, so stated",
              "Readcode": "B937000"
            }
          },
          {
            "code": "23875.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia with excess of blasts",
              "Readcode": "B937200"
            }
          },
          {
            "code": "44420.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Refractory anaemia with excess of blasts with transformation",
              "Readcode": "B937300"
            }
          },
          {
            "code": "45143.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "[X]Myelodysplastic syndrome, unspecified",
              "Readcode": "ByuHD00"
            }
          },
          {
            "code": "45285.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Myelodysplastic syndrome, unspecified",
              "Readcode": "B937W00"
            }
          },
          {
            "code": "4561.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "Myelodysplasia",
              "Readcode": "B937W11"
            }
          },
          {
            "code": "56756.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "[M] Refractory anaemia with sideroblasts",
              "Readcode": "BBmA.00"
            }
          },
          {
            "code": "60186.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "[M]Refractory anaemia+excess of blasts with transformation",
              "Readcode": "BBmB.00"
            }
          },
          {
            "code": "7799.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "[M]Myelodysplastic syndrome",
              "Readcode": "BBv..00"
            }
          },
          {
            "code": "94921.0",
            "description": "Diagnosis of Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "ReadcodeDescr": "[M] Refractory anaemia with excess of blasts",
              "Readcode": "BBmL.00"
            }
          }
        ]
      },
      {
        "concept_id": 848,
        "concept_version_id": 2835,
        "concept_name": "Myelodysplastic syndromes - Secondary care - Diagnoses",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH60",
        "phenotype_version_id": 120,
        "phenotype_name": "Myelodysplastic syndromes",
        "code_attribute_header": [
          "Disease",
          "Category"
        ],
        "codes": [
          {
            "code": "D46",
            "description": "Myelodysplastic syndromes",
            "attributes": {
              "Disease": "Myelodysplastic syndromes",
              "Category": "Diagnosis of Myelodysplastic syndromes"
            }
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/md4f-bq40",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 120,
        "version_name": "Myelodysplastic syndromes",
        "version_date": "2021-10-06T16:01:23.964813Z",
        "is_published": true,
        "is_latest": true
      }
    ]
  }
]