[
  {
    "phenotype_id": "PH628",
    "phenotype_version_id": 1256,
    "name": "Dementia",
    "definition": "Objectives: \n\nLittle is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.\n\n\nDesign: \n\nRetrospective cohort study from 2000 to 2012.\n\n\nSetting: \n\n627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.\n\n\nParticipants: \n\nEach identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.\n\n\nOutcome measures: \n\nPrevalence rates were calculated for 16 conditions.\n\n\n\n\n\n\n\n\n",
    "implementation": "",
    "publications": [
      {
        "doi": null,
        "details": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015."
      }
    ],
    "validation": "",
    "citation_requirements": "",
    "created": "2021-10-06T16:27:37.096491Z",
    "author": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis",
    "collections": [
      {
        "name": "ClinicalCodes Repository",
        "value": 25
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 1,
    "updated": "2021-10-06T16:27:37.096518Z",
    "sex": [
      {
        "name": "Male",
        "value": "1"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": [
      {
        "name": "CPRD GOLD",
        "value": 5,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      }
    ],
    "coding_system": [
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "OXMIS codes",
        "value": 15
      }
    ],
    "event_date_range": "01/04/2000 - 31/03/2012",
    "concept_information": [
      {
        "concept_id": 2038,
        "concept_version_id": 5214,
        "concept_name": "Dementia - Primary Care",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH628",
        "phenotype_version_id": 1256,
        "phenotype_name": "Dementia",
        "code_attribute_header": [
          "Entity type",
          "Coding System (OXMIS Read)",
          "Category"
        ],
        "codes": [
          {
            "code": "E00..00",
            "description": "Senile and presenile organic psychotic conditions",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E000.00",
            "description": "Uncomplicated senile dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001.00",
            "description": "Presenile dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001000",
            "description": "Uncomplicated presenile dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E00..11",
            "description": "Senile dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001100",
            "description": "Presenile dementia with delirium",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E00..12",
            "description": "Senile/presenile dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001200",
            "description": "Presenile dementia with paranoia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001300",
            "description": "Presenile dementia with depression",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E001z00",
            "description": "Presenile dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E002.00",
            "description": "Senile dementia with depressive or paranoid features",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E002000",
            "description": "Senile dementia with paranoia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E002100",
            "description": "Senile dementia with depression",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E002z00",
            "description": "Senile dementia with depressive or paranoid features NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E003.00",
            "description": "Senile dementia with delirium",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004.00",
            "description": "Arteriosclerotic dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004000",
            "description": "Uncomplicated arteriosclerotic dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004100",
            "description": "Arteriosclerotic dementia with delirium",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004.11",
            "description": "Multi infarct dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004200",
            "description": "Arteriosclerotic dementia with paranoia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004300",
            "description": "Arteriosclerotic dementia with depression",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E004z00",
            "description": "Arteriosclerotic dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E00y.00",
            "description": "Other senile and presenile organic psychoses",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E00y.11",
            "description": "Presbyophrenic psychosis",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E00z.00",
            "description": "Senile or presenile psychoses NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E012.00",
            "description": "Other alcoholic dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E012000",
            "description": "Chronic alcoholic brain syndrome",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E012.11",
            "description": "Alcoholic dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "E041.00",
            "description": "Dementia in conditions EC",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00.00",
            "description": "[X]Dementia in Alzheimer's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00000",
            "description": "[X]Dementia in Alzheimer's disease with early onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00011",
            "description": "[X]Presenile dementia,Alzheimer's type",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00012",
            "description": "[X]Primary degen dementia, Alzheimer's type, presenile onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00013",
            "description": "[X]Alzheimer's disease type 2",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00100",
            "description": "[X]Dementia in Alzheimer's disease with late onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00111",
            "description": "[X]Alzheimer's disease type 1",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00112",
            "description": "[X]Senile dementia,Alzheimer's type",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00113",
            "description": "[X]Primary degen dementia of Alzheimer's type, senile onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00200",
            "description": "[X]Dementia in Alzheimer's dis, atypical or mixed type",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00z00",
            "description": "[X]Dementia in Alzheimer's disease, unspecified",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu00z11",
            "description": "[X]Alzheimer's dementia unspec",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01.00",
            "description": "[X]Vascular dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01000",
            "description": "[X]Vascular dementia of acute onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01100",
            "description": "[X]Multi-infarct dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01.11",
            "description": "[X]Arteriosclerotic dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01111",
            "description": "[X]Predominantly cortical dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01200",
            "description": "[X]Subcortical vascular dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01300",
            "description": "[X]Mixed cortical and subcortical vascular dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01y00",
            "description": "[X]Other vascular dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu01z00",
            "description": "[X]Vascular dementia, unspecified",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02.00",
            "description": "[X]Dementia in other diseases classified elsewhere",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02000",
            "description": "[X]Dementia in Pick's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02100",
            "description": "[X]Dementia in Creutzfeldt-Jakob disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02200",
            "description": "[X]Dementia in Huntington's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02300",
            "description": "[X]Dementia in Parkinson's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02400",
            "description": "[X]Dementia in human immunodef virus [HIV] disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02500",
            "description": "[X]Lewy body dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02y00",
            "description": "[X]Dementia in other specified diseases classif elsewhere",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z00",
            "description": "[X] Unspecified dementia",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z11",
            "description": "[X] Presenile dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z12",
            "description": "[X] Presenile psychosis NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z13",
            "description": "[X] Primary degenerative dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z14",
            "description": "[X] Senile dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z15",
            "description": "[X] Senile psychosis NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu02z16",
            "description": "[X] Senile dementia, depressed or paranoid type",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Eu10711",
            "description": "[X]Alcoholic dementia NOS",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F110.00",
            "description": "Alzheimer's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F110000",
            "description": "Alzheimer's disease with early onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F110100",
            "description": "Alzheimer's disease with late onset",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F111.00",
            "description": "Pick's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F112.00",
            "description": "Senile degeneration of brain",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "F116.00",
            "description": "Lewy body disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          },
          {
            "code": "Fyu3000",
            "description": "[X]Other Alzheimer's disease",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "Read",
              "Category": "diagnostic"
            }
          }
        ]
      },
      {
        "concept_id": 2039,
        "concept_version_id": 5216,
        "concept_name": "Dementia - Primary Care",
        "coding_system": {
          "id": 15,
          "name": "OXMIS codes",
          "description": "OXMIS codes"
        },
        "phenotype_id": "PH628",
        "phenotype_version_id": 1256,
        "phenotype_name": "Dementia",
        "code_attribute_header": [
          "Entity type",
          "Coding System (OXMIS Read)",
          "Category"
        ],
        "codes": [
          {
            "code": "2900",
            "description": "SENILE DEMENTIA",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "2901A",
            "description": "PRESENILE DEMENTIA",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "2901B",
            "description": "ALZHEIMER'S DISEASE",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "2901D",
            "description": "JACOB- CREUZFELDT DISEASE WITH DEMENTIA",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "2919",
            "description": "DEMENTIA ALCOHOLIC",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "2930",
            "description": "DEMENTIA ARTERIOSCLEROTIC",
            "attributes": {
              "Entity type": "res26: Dementia",
              "Coding System (OXMIS Read)": "OXMIS",
              "Category": "diagnostic"
            }
          },
          {
            "code": "299 B",
            "description": "DEMENTIA",
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            "code": "299 G",
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    "status": 2,
    "doi": "https://doi.org/10.48533/pymj-b484",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "ieuan.scanlon",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 1256,
        "version_name": "Dementia",
        "version_date": "2021-10-06T16:27:37.116739Z",
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]