[ { "phenotype_id": "PH634", "phenotype_version_id": 1268, "name": "Learning Disability", "definition": "Objectives: \n\nLittle is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.\n\n\nDesign: \n\nRetrospective cohort study from 2000 to 2012.\n\n\nSetting: \n\n627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.\n\n\nParticipants: \n\nEach identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.\n\n\nOutcome measures: \n\nPrevalence rates were calculated for 16 conditions.\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": null, "details": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015." } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:27:50.607275Z", "author": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis", "collections": [ { "name": "ClinicalCodes Repository", "value": 25 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:27:50.607303Z", "sex": [ { "name": "Male", "value": "1" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 } ], "coding_system": [ { "name": "Read codes v2", "value": 5 }, { "name": "OXMIS codes", "value": 15 } ], "event_date_range": "01/04/2000 - 31/03/2012", "concept_information": [ { "concept_id": 2050, "concept_version_id": 5238, "concept_name": "Learning Disability - Primary Care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH634", "phenotype_version_id": 1268, "phenotype_name": "Learning Disability", "code_attribute_header": [ "Entity type", "Coding System (OXMIS Read)", "Category" ], "codes": [ { "code": "13Z4E00", "description": "Learning difficulties", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E2F2.00", "description": "Other specific learning difficulty", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E3...00", "description": "Mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E30..00", "description": "Mild mental retardation, IQ in range 50-70", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E31..00", "description": "Other specified mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E310.00", "description": "Moderate mental retardation, IQ in range 35-49", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E311.00", "description": "Severe mental retardation, IQ in range 20-34", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E312.00", "description": "Profound mental retardation with IQ less than 20", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E31z.00", "description": "Other specified mental retardation NOS", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E3y..00", "description": "Other specified mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "E3z..00", "description": "Mental retardation NOS", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7..00", "description": "[X]Mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu70.00", "description": "[X]Mild mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu70y00", "description": "[X]Mild mental retardation, other impairments of behaviour", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu70z00", "description": "[X]Mild mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu71.00", "description": "[X]Moderate mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu71z00", "description": "[X]Mod mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu72.00", "description": "[X]Severe mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu72y00", "description": "[X]Severe mental retardation, other impairments of behaviour", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu72z00", "description": "[X]Sev mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu73.00", "description": "[X]Profound mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu73y00", "description": "[X]Profound mental retardation, other impairments of behavr", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu73z00", "description": "[X]Prfnd mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7y.00", "description": "[X]Other mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7yy00", "description": "[X]Other mental retardation, other impairments of behaviour", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7yz00", "description": "[X]Other mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7z.00", "description": "[X]Unspecified mental retardation", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu7zz00", "description": "[X]Unsp mental retardation without mention impairment behav", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu81.00", "description": "[X]Specific developmental disorders of scholastic skills", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu81y00", "description": "[X]Other developmental disorders of scholastic skills", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu81z00", "description": "[X]Developmental disorder of scholastic skills, unspecified", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu81z11", "description": "[X]Learning disability NOS", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Eu84112", "description": "[X]Mental retardation with autistic features", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Z7CD200", "description": "Learning difficulties", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "ZS34.00", "description": "Developmental disorder of scholastic skill", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "ZS34.11", "description": "Learning disability", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } } ] }, { "concept_id": 2051, "concept_version_id": 5240, "concept_name": "Learning Disability - Primary Care", "coding_system": { "id": 15, "name": "OXMIS codes", "description": "OXMIS codes" }, "phenotype_id": "PH634", "phenotype_version_id": 1268, "phenotype_name": "Learning Disability", "code_attribute_header": [ "Entity type", "Coding System (OXMIS Read)", "Category" ], "codes": [ { "code": "3061LF", "description": "LEARNING DIFFICULTY", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "311", "description": "MENTAL RETARDATION MILD", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "312", "description": "MENTAL RETARDATION MODERATE", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "313", "description": "MENTAL RETARDATION SEVERE", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "315", "description": "RETARDATION MENTAL", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "315 HC", "description": "MENTAL HANDICAP", "attributes": { "Entity type": "res26: LearningDis", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/n3jk-xz37", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 1268, "version_name": "Learning Disability", "version_date": "2021-10-06T16:27:50.629597Z", "is_published": true, "is_latest": true } ] } ]