[ { "phenotype_id": "PH637", "phenotype_version_id": 1274, "name": "Rheumatoid arthritis", "definition": "Objectives: \n\nLittle is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.\n\n\nDesign: \n\nRetrospective cohort study from 2000 to 2012.\n\n\nSetting: \n\n627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.\n\n\nParticipants: \n\nEach identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.\n\n\nOutcome measures: \n\nPrevalence rates were calculated for 16 conditions.\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": null, "details": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015." } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:27:56.073161Z", "author": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis", "collections": [ { "name": "ClinicalCodes Repository", "value": 25 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:27:56.073189Z", "sex": [ { "name": "Male", "value": "1" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 } ], "coding_system": [ { "name": "Read codes v2", "value": 5 } ], "event_date_range": "01/04/2000 - 31/03/2012", "concept_information": [ { "concept_id": 2055, "concept_version_id": 5248, "concept_name": "Rheumatoid arthritis - Primary Care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH637", "phenotype_version_id": 1274, "phenotype_name": "Rheumatoid arthritis", "code_attribute_header": [ "Entity type", "Category", "Coding System (Read)" ], "codes": [ { "code": "14G1.00", "description": "H/O: rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "38DZ.00", "description": "Disease activity score in rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "66H..13", "description": "Rheumatoid arthrit. monitoring", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "7P20300", "description": "Delivery of rehabilitation for rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "F371200", "description": "Polyneuropathy in rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "F396400", "description": "Myopathy due to rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "G5y8.00", "description": "Rheumatoid myocarditis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "G5yA.00", "description": "Rheumatoid carditis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "H570.00", "description": "Rheumatoid lung", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N04..00", "description": "Rheumatoid arthritis and other inflammatory polyarthropathy", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040.00", "description": "Rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040000", "description": "Rheumatoid arthritis of cervical spine", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040100", "description": "Other rheumatoid arthritis of spine", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040200", "description": "Rheumatoid arthritis of shoulder", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040400", "description": "Rheumatoid arthritis of acromioclavicular joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040500", "description": "Rheumatoid arthritis of elbow", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040600", "description": "Rheumatoid arthritis of distal radio-ulnar joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040700", "description": "Rheumatoid arthritis of wrist", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040800", "description": "Rheumatoid arthritis of MCP joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040900", "description": "Rheumatoid arthritis of PIP joint of finger", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040A00", "description": "Rheumatoid arthritis of DIP joint of finger", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040B00", "description": "Rheumatoid arthritis of hip", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040C00", "description": "Rheumatoid arthritis of sacro-iliac joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040D00", "description": "Rheumatoid arthritis of knee", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040F00", "description": "Rheumatoid arthritis of ankle", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040G00", "description": "Rheumatoid arthritis of subtalar joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040H00", "description": "Rheumatoid arthritis of talonavicular joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040J00", "description": "Rheumatoid arthritis of other tarsal joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040K00", "description": "Rheumatoid arthritis of 1st MTP joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040L00", "description": "Rheumatoid arthritis of lesser MTP joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040N00", "description": "Rheumatoid vasculitis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040P00", "description": "Seronegative rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040R00", "description": "Rheumatoid nodule", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040S00", "description": "Rheumatoid arthritis - multiple joint", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N040T00", "description": "Flare of rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N041.00", "description": "Felty's syndrome", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N042.00", "description": "Other rheumatoid arthropathy + visceral/systemic involvement", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N042100", "description": "Rheumatoid lung disease", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N042200", "description": "Rheumatoid nodule", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N042z00", "description": "Rheumatoid arthropathy + visceral/systemic involvement NOS", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N043000", "description": "Juvenile rheumatoid arthropathy unspecified", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N043100", "description": "Acute polyarticular juvenile rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N043200", "description": "Pauciarticular juvenile rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N043300", "description": "Monarticular juvenile rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N043z00", "description": "Juvenile rheumatoid arthritis NOS", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N045500", "description": "Juvenile rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N047.00", "description": "Seropositive errosive rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N04X.00", "description": "Seropositive rheumatoid arthritis, unspecified", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N04y000", "description": "Rheumatoid lung", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N04y011", "description": "Caplan's syndrome", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "N04y012", "description": "Fibrosing alveolitis associated with rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "Nyu1100", "description": "[X]Other seropositive rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "Nyu1200", "description": "[X]Other specified rheumatoid arthritis", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } }, { "code": "Nyu1G00", "description": "[X]Seropositive rheumatoid arthritis, unspecified", "attributes": { "Entity type": "res26: RA", "Category": "diagnostic", "Coding System (Read)": "Read" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/9vsf-yd32", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 1274, "version_name": "Rheumatoid arthritis", "version_date": "2021-10-06T16:27:56.100638Z", "is_published": true, "is_latest": true } ] } ]