[ { "phenotype_id": "PH639", "phenotype_version_id": 1278, "name": "Stroke", "definition": "Objectives: \n\nLittle is known about the prevalence of comorbidity rates in people with severe mental illness (SMI) in UK primary care. We calculated the prevalence of SMI by UK country, English region and deprivation quintile, antipsychotic and antidepressant medication prescription rates for people with SMI, and prevalence rates of common comorbidities in people with SMI compared with people without SMI.\n\n\nDesign: \n\nRetrospective cohort study from 2000 to 2012.\n\n\nSetting: \n\n627 general practices contributing to the Clinical Practice Research Datalink, a UK primary care database.\n\n\nParticipants: \n\nEach identified case (346 551) was matched for age, sex and general practice with 5 randomly selected control cases (1 732 755) with no diagnosis of SMI in each yearly time point.\n\n\nOutcome measures: \n\nPrevalence rates were calculated for 16 conditions.\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": null, "details": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis, Inequalities in physical comorbidity a longitudinal comparative cohort study of people with severe mental illness in the UK. BMJ Open, 5(e009010), 2015." } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:28:01.776820Z", "author": "Siobhan Reilly, Ivan Olier, Claire Planner, Tim Doran, David Reeves, Darren M Ashcroft, Linda Gask, Evangelos Kontopantelis", "collections": [ { "name": "ClinicalCodes Repository", "value": 25 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:28:01.776849Z", "sex": [ { "name": "Male", "value": "1" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 } ], "coding_system": [ { "name": "Read codes v2", "value": 5 }, { "name": "OXMIS codes", "value": 15 } ], "event_date_range": "01/04/2000 - 31/03/2012", "concept_information": [ { "concept_id": 2057, "concept_version_id": 5252, "concept_name": "Stroke - Primary Care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH639", "phenotype_version_id": 1278, "phenotype_name": "Stroke", "code_attribute_header": [ "Entity type", "Coding System (OXMIS Read)", "Category" ], "codes": [ { "code": "G61..00", "description": "Intracerebral haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G610.00", "description": "Cortical haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G611.00", "description": "Internal capsule haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61..11", "description": "CVA - cerebrovascular accid due to intracerebral haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61..12", "description": "Stroke due to intracerebral haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G612.00", "description": "Basal nucleus haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G613.00", "description": "Cerebellar haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G614.00", "description": "Pontine haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G615.00", "description": "Bulbar haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G616.00", "description": "External capsule haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G618.00", "description": "Intracerebral haemorrhage, multiple localized", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61X.00", "description": "Intracerebral haemorrhage in hemisphere, unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61X000", "description": "Left sided intracerebral haemorrhage, unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61X100", "description": "Right sided intracerebral haemorrhage, unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G61z.00", "description": "Intracerebral haemorrhage NOS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G63y000", "description": "Cerebral infarct due to thrombosis of precerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G63y100", "description": "Cerebral infarction due to embolism of precerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64..00", "description": "Cerebral arterial occlusion", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G640.00", "description": "Cerebral thrombosis", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G640000", "description": "Cerebral infarction due to thrombosis of cerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G641.00", "description": "Cerebral embolism", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G641000", "description": "Cerebral infarction due to embolism of cerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64..11", "description": "CVA - cerebral artery occlusion", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G641.11", "description": "Cerebral embolus", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64..12", "description": "Infarction - cerebral", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64..13", "description": "Stroke due to cerebral arterial occlusion", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z.00", "description": "Cerebral infarction NOS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z000", "description": "Brainstem infarction", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z100", "description": "Wallenberg syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z.11", "description": "Brainstem infarction NOS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z111", "description": "Lateral medullary syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z.12", "description": "Cerebellar infarction", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z200", "description": "Left sided cerebral infarction", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z300", "description": "Right sided cerebral infarction", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G64z400", "description": "Infarction of basal ganglia", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65..00", "description": "Transient cerebral ischaemia", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G650.00", "description": "Basilar artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G650.11", "description": "Insufficiency - basilar artery", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G651.00", "description": "Vertebral artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G651000", "description": "Vertebro-basilar artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65..11", "description": "Drop attack", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65..12", "description": "Transient ischaemic attack", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65..13", "description": "Vertebro-basilar insufficiency", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G652.00", "description": "Subclavian steal syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G653.00", "description": "Carotid artery syndrome hemispheric", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G654.00", "description": "Multiple and bilateral precerebral artery syndromes", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G656.00", "description": "Vertebrobasilar insufficiency", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65y.00", "description": "Other transient cerebral ischaemia", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65z.00", "description": "Transient cerebral ischaemia NOS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65z000", "description": "Impending cerebral ischaemia", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65z100", "description": "Intermittent cerebral ischaemia", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G65zz00", "description": "Transient cerebral ischaemia NOS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G66..00", "description": "Stroke and cerebrovascular accident unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G660.00", "description": "Middle cerebral artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G661.00", "description": "Anterior cerebral artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G66..11", "description": "CVA unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G66..12", "description": "Stroke unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G66..13", "description": "CVA - Cerebrovascular accident unspecified", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G662.00", "description": "Posterior cerebral artery syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G663.00", "description": "Brain stem stroke syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G664.00", "description": "Cerebellar stroke syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G665.00", "description": "Pure motor lacunar syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G666.00", "description": "Pure sensory lacunar syndrome", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G667.00", "description": "Left sided CVA", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G668.00", "description": "Right sided CVA", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G6W..00", "description": "Cereb infarct due unsp occlus/stenos precerebr arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "G6X..00", "description": "Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6200", "description": "[X]Other intracerebral haemorrhage", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6300", "description": "[X]Cerebrl infarctn due/unspcf occlusn or sten/cerebrl artrs", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6400", "description": "[X]Other cerebral infarction", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6500", "description": "[X]Occlusion and stenosis of other precerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6600", "description": "[X]Occlusion and stenosis of other cerebral arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "Gyu6G00", "description": "[X]Cereb infarct due unsp occlus/stenos precerebr arteries", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "L440.11", "description": "CVA - cerebrovascular accident in the puerperium", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } }, { "code": "L440.12", "description": "Stroke in the puerperium", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "Read", "Category": "diagnostic" } } ] }, { "concept_id": 2058, "concept_version_id": 5254, "concept_name": "Stroke - Primary Care", "coding_system": { "id": 15, "name": "OXMIS codes", "description": "OXMIS codes" }, "phenotype_id": "PH639", "phenotype_version_id": 1278, "phenotype_name": "Stroke", "code_attribute_header": [ "Entity type", "Coding System (OXMIS Read)", "Category" ], "codes": [ { "code": "4350AT", "description": "TRANSIENT ISCHAEMIC ATTACKS WITH HYPERTE", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4359AT", "description": "TRANSIENT ISCHAEMIC ATTACKS", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4360A", "description": "CEREBROVASCULAR ACCIDENT WITH HYPERTENSI", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4360B", "description": "STROKE WITH HYPERTENSION", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4369A", "description": "CVA (CEREBROVASCULAR ACCIDENT)", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4369AL", "description": "CEREBROVASCULAR ACCIDENT LEFT", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4369AR", "description": "CEREBROVASCULAR ACCIDENT RIGHT", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4369B", "description": "STROKE", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } }, { "code": "4369BN", "description": "SYNDROME STROKE", "attributes": { "Entity type": "res26: Stroke", "Coding System (OXMIS Read)": "OXMIS", "Category": "diagnostic" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/2qp9-1m46", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 1278, "version_name": "Stroke", "version_date": "2021-10-06T16:28:01.804417Z", "is_published": true, "is_latest": true } ] } ]