[ { "phenotype_id": "PH68", "phenotype_version_id": 136, "name": "Polycythaemia vera", "definition": "At the specified date, a patient is defined as having had 'Polycythaemia vera' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Polycythaemia vera' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care\n\n\n1. ALL diagnoses of 'Polycythaemia vera' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:01:46.289427Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:01:46.289457Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Polycythaemia-vera---b95642d0-1752-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Polycythaemia-vera.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 870, "concept_version_id": 2879, "concept_name": "Polycythaemia vera - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH68", "phenotype_version_id": 136, "phenotype_name": "Polycythaemia vera", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "B671.00", "description": "Chronic erythraemia", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "37468.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "B671.11", "description": "Heilmeyer - Schoner disease", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "63653.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "B934.00", "description": "Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "2481.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "B934.11", "description": "Polycythaemia rubra vera", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "5542.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "B934.12", "description": "Primary polycythaemia", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "36790.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "BBs0.00", "description": "[M]Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "16922.0", "Category": "Diagnosis of Polycythaemia vera" } }, { "code": "BBs0.11", "description": "[M]Polycythaemia rubra vera", "attributes": { "Disease": "Polycythaemia vera", "Medcode": "58888.0", "Category": "Diagnosis of Polycythaemia vera" } } ] }, { "concept_id": 871, "concept_version_id": 2881, "concept_name": "Polycythaemia vera - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH68", "phenotype_version_id": 136, "phenotype_name": "Polycythaemia vera", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "16922.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "[M]Polycythaemia vera", "Readcode": "BBs0.00" } }, { "code": "2481.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "Polycythaemia vera", "Readcode": "B934.00" } }, { "code": "36790.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "Primary polycythaemia", "Readcode": "B934.12" } }, { "code": "37468.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "Chronic erythraemia", "Readcode": "B671.00" } }, { "code": "5542.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "Polycythaemia rubra vera", "Readcode": "B934.11" } }, { "code": "58888.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "[M]Polycythaemia rubra vera", "Readcode": "BBs0.11" } }, { "code": "63653.0", "description": "Diagnosis of Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "ReadcodeDescr": "Heilmeyer - Schoner disease", "Readcode": "B671.11" } } ] }, { "concept_id": 872, "concept_version_id": 2883, "concept_name": "Polycythaemia vera - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH68", "phenotype_version_id": 136, "phenotype_name": "Polycythaemia vera", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "D45", "description": "Polycythaemia vera", "attributes": { "Disease": "Polycythaemia vera", "Category": "Diagnosis of Polycythaemia vera" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/88db-dz06", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 136, "version_name": "Polycythaemia vera", "version_date": "2021-10-06T16:01:46.318813Z", "is_published": true, "is_latest": true } ] } ]