[ { "phenotype_id": "PH71", "phenotype_version_id": 142, "name": "Pulmonary embolism", "definition": "At the specified date, a patient is defined as having had 'Pulmonary embolism' IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:\n\n\nPrimary care\n\n\n1. 'Pulmonary embolism' diagnosis or history of diagnosis during a consultation \n\nOR\nSecondary care (ICD10)\n\n\n1. ALL diagnoses of 'Pulmonary embolism' or history of diagnosis during a hospitalization\n\n\n\n\n\n\n\n\n\n\n\n\n", "implementation": "", "publications": [ { "doi": "10.1016/S2589-7500(19)30012-3", "details": "Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3" } ], "validation": "", "citation_requirements": "", "created": "2021-10-06T16:01:54.372069Z", "author": "Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A", "collections": [ { "name": "CALIBER", "value": 21 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 1, "updated": "2021-10-06T16:01:54.372099Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "https://kclhi.org/phenoflow/workflows/github.com/phenoflow/Pulmonary-embolism---1358c090-1754-11ef-9de4-4d4ea830ad16/blob/read-potential-cases-fhir/Pulmonary-embolism.cwl", "data_sources": [ { "name": "CPRD GOLD", "value": 5, "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f", "url": "https://healthdatagateway.org/en/dataset/694", "datasource_id": 694 }, { "name": "HES Admitted Patient Care data for CPRD GOLD", "value": 9, "uid": "4bcf64a6-f404-4ef4-ae6e-172512ab5f43", "url": "https://healthdatagateway.org/en/dataset/674", "datasource_id": 674 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "Read codes v2", "value": 5 }, { "name": "Med codes", "value": 8 } ], "event_date_range": "01/01/1999 - 01/07/2016", "concept_information": [ { "concept_id": 880, "concept_version_id": 2899, "concept_name": "Pulmonary embolism - Primary care", "coding_system": { "id": 5, "name": "Read codes v2", "description": "Read codes v2" }, "phenotype_id": "PH71", "phenotype_version_id": 142, "phenotype_name": "Pulmonary embolism", "code_attribute_header": [ "Disease", "Medcode", "Category" ], "codes": [ { "code": "14AC.00", "description": "H/O: pulmonary embolus", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "10280.0", "Category": "History of Pulmonary embolism" } }, { "code": "7A09300", "description": "Open embolectomy of pulmonary artery", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "45740.0", "Category": "Procedure for Pulmonary embolism" } }, { "code": "7A09311", "description": "Trendelenburg pulmonary embolectomy", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "34687.0", "Category": "Procedure for Pulmonary embolism" } }, { "code": "7A0A100", "description": "Percutaneous transluminal embolectomy of pulmonary artery", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "65459.0", "Category": "Procedure for Pulmonary embolism" } }, { "code": "7A0B000", "description": "Pulmonary thromboendarterectomy", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "89238.0", "Category": "Procedure for Pulmonary embolism" } }, { "code": "G401.00", "description": "Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "1266.0", "Category": "Diagnosis of Pulmonary embolism" } }, { "code": "G401000", "description": "Post operative pulmonary embolus", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "18121.0", "Category": "Diagnosis of Pulmonary embolism" } }, { "code": "G401100", "description": "Recurrent pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "96209.0", "Category": "Diagnosis of Pulmonary embolism" } }, { "code": "G401.12", "description": "Pulmonary embolus", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "9701.0", "Category": "Diagnosis of Pulmonary embolism" } }, { "code": "ZV12900", "description": "[V] Personal history of pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "Medcode": "16976.0", "Category": "History of Pulmonary embolism" } } ] }, { "concept_id": 881, "concept_version_id": 2901, "concept_name": "Pulmonary embolism - Primary care", "coding_system": { "id": 8, "name": "Med codes", "description": "Med codes" }, "phenotype_id": "PH71", "phenotype_version_id": 142, "phenotype_name": "Pulmonary embolism", "code_attribute_header": [ "Disease", "ReadcodeDescr", "Readcode" ], "codes": [ { "code": "10280.0", "description": "History of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "H/O: pulmonary embolus", "Readcode": "14AC.00" } }, { "code": "1266.0", "description": "Diagnosis of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Pulmonary embolism", "Readcode": "G401.00" } }, { "code": "16976.0", "description": "History of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "[V] Personal history of pulmonary embolism", "Readcode": "ZV12900" } }, { "code": "18121.0", "description": "Diagnosis of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Post operative pulmonary embolus", "Readcode": "G401000" } }, { "code": "34687.0", "description": "Procedure for Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Trendelenburg pulmonary embolectomy", "Readcode": "7A09311" } }, { "code": "45740.0", "description": "Procedure for Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Open embolectomy of pulmonary artery", "Readcode": "7A09300" } }, { "code": "65459.0", "description": "Procedure for Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Percutaneous transluminal embolectomy of pulmonary artery", "Readcode": "7A0A100" } }, { "code": "89238.0", "description": "Procedure for Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Pulmonary thromboendarterectomy", "Readcode": "7A0B000" } }, { "code": "96209.0", "description": "Diagnosis of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Recurrent pulmonary embolism", "Readcode": "G401100" } }, { "code": "9701.0", "description": "Diagnosis of Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "ReadcodeDescr": "Pulmonary embolus", "Readcode": "G401.12" } } ] }, { "concept_id": 882, "concept_version_id": 2903, "concept_name": "Pulmonary embolism - Secondary care - Diagnoses", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH71", "phenotype_version_id": 142, "phenotype_name": "Pulmonary embolism", "code_attribute_header": [ "Disease", "Category" ], "codes": [ { "code": "I26", "description": "Pulmonary embolism", "attributes": { "Disease": "Pulmonary embolism", "Category": "Diagnosis of Pulmonary embolism" } } ] } ], "status": 2, "doi": "https://doi.org/10.48533/m9ts-t637", "is_deleted": null, "publish_status": 2, "owner": "ieuan.scanlon", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 142, "version_name": "Pulmonary embolism", "version_date": "2021-10-06T16:01:54.397704Z", "is_published": true, "is_latest": true } ] } ]