[
  {
    "phenotype_id": "PH793",
    "phenotype_version_id": 2217,
    "name": "Bronchiolitis Secondary care",
    "definition": "\n- Not found code search\n- Not available",
    "implementation": "\n\nThese codes are not intended to be mandatory, but are to be used as a starting point for the identification of Acute Bronchiolitis in routine Electronic Health Record (EHR). Each study may differ in the sensitivity and specificity of the coding required.  \n\n \n\nAccording to the National Health Service (NHS), Bronchiolitis is defined as a common lower respiratory tract infection that affects babies and young children under 2 years old.\n\nhttps://www.nhs.uk/conditions/bronchiolitis/\n\n \n\nAccording to the National Institute for Health and Care Excellence (NICE) guidelines, a Bronchiolitis diagnosis can me made if the child has a coryzal prodrome lasting 1 to 3 days, followed by: persistent cough and either tachypnoea or chest recession (or both) and either wheeze or crackles on chest auscultation (or both). \n\nhttps://www.nice.org.uk/guidance/ng9/chapter/Key-priorities-for-implementation\n\n \n\nIt is therefore recommended that these codes are used for individuals with a respiratory tract infection restricted to lower respiratory tract in young children under 2 years old. \n\nNot found code search\n\n",
    "publications": [
      {
        "doi": null,
        "details": "Publications in 2020-2021 identified in PubMed"
      },
      {
        "doi": "10.1016/S2214-109X(20)30421-6",
        "details": "Reyburn R, Tuivaga E, Nguyen CD, Ratu FT, Nand D, Kado J, Tikoduadua L, Jenkins K, de Campo M, Kama M, Devi R, Rafai E, Weinberger DM, Mulholland EK, Russell FM. Effect of ten-valent pneumococcal conjugate vaccine introduction on pneumonia hospital admissions in Fiji: a time-series analysis. Lancet Glob Health. 2021 Jan;9(1):e91-e98. doi: 10.1016/S2214-109X(20)30421-6. Epub 2020 Nov 20. PMID: 33227258."
      },
      {
        "doi": null,
        "details": ">Code repositories"
      },
      {
        "doi": null,
        "details": "**ID**- 1 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res52: respiratory tract infection ICD-10 \n- **Clinical codes**- J21 "
      },
      {
        "doi": null,
        "details": "**ID**- 2 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis due to respiratory syncytial virus \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res52: respiratory tract infection ICD-10 \n- **Clinical codes**- J21.0 "
      },
      {
        "doi": null,
        "details": "**ID**- 3 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis due to human metapneumovirus \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res52: respiratory tract infection ICD-10 \n- **Clinical codes**- J21.1 "
      },
      {
        "doi": null,
        "details": "**ID**- 4 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis due to other specified organisms \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res52: respiratory tract infection ICD-10 \n- **Clinical codes**- J21.8 "
      },
      {
        "doi": null,
        "details": "**ID**- 5 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis, unspecified \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res52: respiratory tract infecti \n- **Clinical codes**- J21.9 "
      },
      {
        "doi": null,
        "details": "**ID**- 6 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchitis and bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H06..00 "
      },
      {
        "doi": null,
        "details": "**ID**- 7 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H061.00 "
      },
      {
        "doi": null,
        "details": "**ID**- 8 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute capillary bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H061000 "
      },
      {
        "doi": null,
        "details": "**ID**- 9 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis with bronchospasm \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H061200 "
      },
      {
        "doi": null,
        "details": "**ID**- 10 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute exudative bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H061300 "
      },
      {
        "doi": null,
        "details": "**ID**- 11 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchiolitis NOS \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H061z00 "
      },
      {
        "doi": null,
        "details": "**ID**- 12 \n- **Repository**- Manchester ClinicalCodes \n- **Description**- Acute bronchitis or bronchiolitis NOS \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- res70: LRTI \n- **Clinical codes**- H06z.00 "
      },
      {
        "doi": null,
        "details": "**ID**- 13 \n- **Repository**- HDR UK National Phenomics Resource Project \n- **Description**- Acute bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- Diagnosis of Lower Respiratory Tract Infections \n- **Clinical codes**- J21 "
      },
      {
        "doi": null,
        "details": "**ID**- 14 \n- **Repository**- OpenSAFELY \n- **Description**- [X]Acute bronchiolitis due to other specified organisms \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- Hyu11 "
      },
      {
        "doi": null,
        "details": "**ID**- 15 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H061. "
      },
      {
        "doi": null,
        "details": "**ID**- 16 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis due to adenovirus \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3_Children \n- **Clinical codes**- X100D "
      },
      {
        "doi": null,
        "details": "**ID**- 17 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis due to human metapneumovirus \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3_Children \n- **Clinical codes**- XaYYt "
      },
      {
        "doi": null,
        "details": "**ID**- 18 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis due to other specified organisms \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0616 "
      },
      {
        "doi": null,
        "details": "**ID**- 19 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis due to respiratory syncytial virus \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0615 "
      },
      {
        "doi": null,
        "details": "**ID**- 20 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis NOS \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H061z "
      },
      {
        "doi": null,
        "details": "**ID**- 21 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchiolitis with bronchospasm \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0612 "
      },
      {
        "doi": null,
        "details": "**ID**- 22 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchitis and bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H06.. "
      },
      {
        "doi": null,
        "details": "**ID**- 23 \n- **Repository**- OpenSAFELY \n- **Description**- Acute bronchitis or bronchiolitis NOS \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H06z. "
      },
      {
        "doi": null,
        "details": "**ID**- 24 \n- **Repository**- OpenSAFELY \n- **Description**- Acute capillary bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0610 "
      },
      {
        "doi": null,
        "details": "**ID**- 25 \n- **Repository**- OpenSAFELY \n- **Description**- Acute exudative bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0613 "
      },
      {
        "doi": null,
        "details": "**ID**- 26 \n- **Repository**- OpenSAFELY \n- **Description**- Acute obliterating bronchiolitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- H0611 "
      },
      {
        "doi": null,
        "details": "**ID**- 27 \n- **Repository**- OpenSAFELY \n- **Description**- Acute viral bronchiolitis\t \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3_Children \n- **Clinical codes**- X100C "
      },
      {
        "doi": null,
        "details": "**ID**- 28 \n- **Repository**- OpenSAFELY \n- **Description**- Bronchiolitis obliterans \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3Map_Code_And_Term \n- **Clinical codes**- X101l "
      },
      {
        "doi": null,
        "details": "**ID**- 29 \n- **Repository**- OpenSAFELY \n- **Description**- Bronchiolitis obliterans with usual interstitial pneumonitis \n- **Conditions**- Acute Bronchiolitis \n- **Publication**- CTV3_Children \n- **Clinical codes**- X102z "
      }
    ],
    "validation": null,
    "citation_requirements": "",
    "created": "2022-01-17T13:59:43.957084Z",
    "author": "Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou",
    "collections": [
      {
        "name": "BREATHE",
        "value": 19
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 2,
    "updated": "2022-08-04T18:38:00.209429Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": [
      {
        "name": "Hospital Episode Statistics Admitted Patient Care",
        "value": 2,
        "uid": "6599230a-df54-4615-937c-d724d239491f",
        "url": "https://healthdatagateway.org/en/dataset/875",
        "datasource_id": 875
      },
      {
        "name": "Patient Episode Dataset for Wales (PEDW)",
        "value": 379,
        "uid": "4c33a5d2-164c-41d7-9797-dc2b008cc852",
        "url": "https://healthdatagateway.org/en/dataset/318",
        "datasource_id": 318
      },
      {
        "name": "Annual District Death Extract (ADDE)",
        "value": 50,
        "uid": "15cf4241-abad-4dcc-95b0-8cd7c02be999",
        "url": "https://healthdatagateway.org/en/dataset/316",
        "datasource_id": 316
      },
      {
        "name": "Civil Registration - Deaths",
        "value": 3,
        "uid": "b9009bc5-b7a6-4036-9d4b-a5133c0b14a3",
        "url": "https://healthdatagateway.org/en/dataset/877",
        "datasource_id": 877
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "ICD11 codes",
        "value": 18
      }
    ],
    "event_date_range": "01/01/2001 to 31/01/2021",
    "concept_information": [
      {
        "concept_id": 2463,
        "concept_version_id": 6326,
        "concept_name": "Bronchiolitis Secondary care -  2",
        "coding_system": {
          "id": 18,
          "name": "ICD11 codes",
          "description": "ICD11 codes"
        },
        "phenotype_id": "PH793",
        "phenotype_version_id": 2217,
        "phenotype_name": "Bronchiolitis Secondary care",
        "code_attribute_header": [
          "BREATHE recommended"
        ],
        "codes": [
          {
            "code": "CA41.0",
            "description": "Acute bronchiolitis due to respiratory syncytial virus",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "CA41.Z",
            "description": "Acute bronchiolitis, unspecified",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          }
        ]
      },
      {
        "concept_id": 2462,
        "concept_version_id": 6324,
        "concept_name": "Bronchiolitis Secondary care -  1",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH793",
        "phenotype_version_id": 2217,
        "phenotype_name": "Bronchiolitis Secondary care",
        "code_attribute_header": [
          "BREATHE recommended",
          "Afonso et al, 2013",
          "Diaz et al, 2016",
          "Troeger et al, 2018",
          "Reyburn et al, 2020",
          "Manchester Clinical Codes",
          "HDR UK National Phenomics Resource Project"
        ],
        "codes": [
          {
            "code": "J21",
            "description": "Acute bronchiolitis",
            "attributes": {
              "BREATHE recommended": "Y",
              "Afonso et al, 2013": "Y",
              "Diaz et al, 2016": "Y",
              "Troeger et al, 2018": "Y",
              "Reyburn et al, 2020": "Y",
              "Manchester Clinical Codes": "Y",
              "HDR UK National Phenomics Resource Project": "Y"
            }
          },
          {
            "code": "J21.0",
            "description": "Acute bronchiolitis due to respiratory syncytial virus",
            "attributes": {
              "BREATHE recommended": "Y",
              "Afonso et al, 2013": "N",
              "Diaz et al, 2016": "N",
              "Troeger et al, 2018": "Y",
              "Reyburn et al, 2020": "N",
              "Manchester Clinical Codes": "Y",
              "HDR UK National Phenomics Resource Project": "N"
            }
          },
          {
            "code": "J21.1",
            "description": "Acute bronchiolitis due to human metapneumovirus",
            "attributes": {
              "BREATHE recommended": "Y",
              "Afonso et al, 2013": "N",
              "Diaz et al, 2016": "N",
              "Troeger et al, 2018": "Y",
              "Reyburn et al, 2020": "N",
              "Manchester Clinical Codes": "Y",
              "HDR UK National Phenomics Resource Project": "N"
            }
          },
          {
            "code": "J21.8",
            "description": "Acute bronchiolitis due to other specified organisms",
            "attributes": {
              "BREATHE recommended": "Y",
              "Afonso et al, 2013": "N",
              "Diaz et al, 2016": "N",
              "Troeger et al, 2018": "Y",
              "Reyburn et al, 2020": "N",
              "Manchester Clinical Codes": "Y",
              "HDR UK National Phenomics Resource Project": "N"
            }
          },
          {
            "code": "J21.9",
            "description": "Acute bronchiolitis, unspecified",
            "attributes": {
              "BREATHE recommended": "Y",
              "Afonso et al, 2013": "N",
              "Diaz et al, 2016": "N",
              "Troeger et al, 2018": "Y",
              "Reyburn et al, 2020": "N",
              "Manchester Clinical Codes": "Y",
              "HDR UK National Phenomics Resource Project": "N"
            }
          }
        ]
      },
      {
        "concept_id": 2461,
        "concept_version_id": 6322,
        "concept_name": "Bronchiolitis Secondary care - BREATHE recommended - 2",
        "coding_system": {
          "id": 18,
          "name": "ICD11 codes",
          "description": "ICD11 codes"
        },
        "phenotype_id": "PH793",
        "phenotype_version_id": 2217,
        "phenotype_name": "Bronchiolitis Secondary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "CA41.0",
            "description": "Acute bronchiolitis due to respiratory syncytial virus",
            "attributes": {}
          },
          {
            "code": "CA41.Z",
            "description": "Acute bronchiolitis, unspecified",
            "attributes": {}
          }
        ]
      },
      {
        "concept_id": 2460,
        "concept_version_id": 6320,
        "concept_name": "Bronchiolitis Secondary care - BREATHE recommended - 1",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH793",
        "phenotype_version_id": 2217,
        "phenotype_name": "Bronchiolitis Secondary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "J21",
            "description": "Acute bronchiolitis",
            "attributes": {}
          },
          {
            "code": "J21.0",
            "description": "Acute bronchiolitis due to respiratory syncytial virus",
            "attributes": {}
          },
          {
            "code": "J21.1",
            "description": "Acute bronchiolitis due to human metapneumovirus",
            "attributes": {}
          },
          {
            "code": "J21.8",
            "description": "Acute bronchiolitis due to other specified organisms",
            "attributes": {}
          },
          {
            "code": "J21.9",
            "description": "Acute bronchiolitis, unspecified",
            "attributes": {}
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/dwp5-wc42",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "zinnurar",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 2217,
        "version_name": "Bronchiolitis Secondary care",
        "version_date": "2022-08-04T18:38:00.490929Z",
        "is_published": true,
        "is_latest": true
      },
      {
        "version_id": 1665,
        "version_name": "Bronchiolitis Secondary care",
        "version_date": "2022-01-17T13:59:44.008004Z",
        "is_published": true,
        "is_latest": false
      }
    ]
  }
]