[ { "phenotype_id": "PH815", "phenotype_version_id": 2249, "name": "Tonsillitis Secondary care", "definition": "The aim of this research work was to identify relevant diagnosis codes available in routine electronic health records from primary and secondary care settings in the UK. We looked for relevant codes in code repositories such as the University of Cambrigdge Primary Care Unit, Manchester Clinical Codes, HDR UK National Phenomics Resource Project, Oxford-RCGP RSC, OpenSAFELY and LSHTM Data Compass. We also searched for peer-reviewed studies published via PubMed in the last 12 months for any relevant codes. Please note that these codes are not intended to be mandatory, but are to be used as a starting point for the identification of Tonsillitis in routine electronic health record. Therefore, each study may differ in the sensitivity and specificity of the coding required. \n- No validations available", "implementation": "\n\nAccording to NHS, tonsillitis is an infection of the tonsils at the backof your throat. It is a common childhood illness, but teenagers and adults can get it too. \n\nhttps://www.nhs.uk/conditions/tonsillitis/\n\nNot found code search\n\n", "publications": [ { "doi": null, "details": "Publications in 2020-2021 identified in PubMed" }, { "doi": "10.1007/s00405-020-06591-7", "details": "Sanders O, Bolton L, Nemeth Z, Hardy A, Meghji S. A 4-year retrospective study of tonsillectomy rate and admission rate of tonsillitis and complications in the East of England and nationally. Eur Arch Otorhinolaryngol. 2021 Jul;278(7):2613-2618. doi: 10.1007/s00405-020-06591-7. Epub 2021 Jan 9. PMID: 33420839." } ], "validation": null, "citation_requirements": "", "created": "2022-01-21T07:11:27.233259Z", "author": "Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou", "collections": [ { "name": "BREATHE", "value": 19 }, { "name": "Phenotype Library", "value": 18 } ], "tags": null, "organisation": null, "world_access": 2, "updated": "2022-08-04T18:56:44.473744Z", "sex": [ { "name": "Both", "value": "3" } ], "type": [ { "name": "Disease or syndrome", "value": "2" } ], "ontology": null, "phenoflowid": "", "data_sources": [ { "name": "Hospital Episode Statistics Admitted Patient Care", "value": 2, "uid": "6599230a-df54-4615-937c-d724d239491f", "url": "https://healthdatagateway.org/en/dataset/875", "datasource_id": 875 }, { "name": "Patient Episode Dataset for Wales (PEDW)", "value": 379, "uid": "4c33a5d2-164c-41d7-9797-dc2b008cc852", "url": "https://healthdatagateway.org/en/dataset/318", "datasource_id": 318 }, { "name": "Annual District Death Extract (ADDE)", "value": 50, "uid": "15cf4241-abad-4dcc-95b0-8cd7c02be999", "url": "https://healthdatagateway.org/en/dataset/316", "datasource_id": 316 }, { "name": "Civil Registration - Deaths", "value": 3, "uid": "b9009bc5-b7a6-4036-9d4b-a5133c0b14a3", "url": "https://healthdatagateway.org/en/dataset/877", "datasource_id": 877 } ], "coding_system": [ { "name": "ICD10 codes", "value": 4 }, { "name": "ICD11 codes", "value": 18 } ], "event_date_range": "01/01/2001 to 31/01/2021", "concept_information": [ { "concept_id": 2557, "concept_version_id": 6514, "concept_name": "Tonsillitis Secondary care - 2", "coding_system": { "id": 18, "name": "ICD11 codes", "description": "ICD11 codes" }, "phenotype_id": "PH815", "phenotype_version_id": 2249, "phenotype_name": "Tonsillitis Secondary care", "code_attribute_header": [ "BREATHE recommended" ], "codes": [ { "code": "CA03.0", "description": "Streptococcal tonsillitis", "attributes": { "BREATHE recommended": "Y" } }, { "code": "CA03.Z", "description": "Acute tonsillitis, unspecified", "attributes": { "BREATHE recommended": "Y" } } ] }, { "concept_id": 2556, "concept_version_id": 6512, "concept_name": "Tonsillitis Secondary care - 1", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH815", "phenotype_version_id": 2249, "phenotype_name": "Tonsillitis Secondary care", "code_attribute_header": [ "BREATHE recommended", "Sanders et al, 2021", "Yap et al, 2017", "Lau et al, 2014", "Al-Hussaini et al, 2013" ], "codes": [ { "code": "B00.2", "description": "Herpesviral gingivostomatitis and pharyngotonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J03", "description": "Acute tonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J03.0", "description": "Streptococcal tonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J030", "description": "Tonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "Y", "Yap et al, 2017": "Y", "Lau et al, 2014": "Y", "Al-Hussaini et al, 2013": "Y" } }, { "code": "J03.8", "description": "Acute tonsillitis due to other specified organisms", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J038", "description": "Tonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "Y", "Yap et al, 2017": "Y", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J03.9", "description": "Acute tonsillitis, unspecified", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J039", "description": "Tonsillitis", "attributes": { "BREATHE recommended": "Y", "Sanders et al, 2021": "Y", "Yap et al, 2017": "Y", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } }, { "code": "J35.0", "description": "Chronic tonsillitis", "attributes": { "BREATHE recommended": "N", "Sanders et al, 2021": "", "Yap et al, 2017": "", "Lau et al, 2014": "", "Al-Hussaini et al, 2013": "" } } ] }, { "concept_id": 2555, "concept_version_id": 6510, "concept_name": "Tonsillitis Secondary care - BREATHE recommended - 2", "coding_system": { "id": 18, "name": "ICD11 codes", "description": "ICD11 codes" }, "phenotype_id": "PH815", "phenotype_version_id": 2249, "phenotype_name": "Tonsillitis Secondary care", "code_attribute_header": [], "codes": [ { "code": "CA03.0", "description": "Streptococcal tonsillitis", "attributes": {} }, { "code": "CA03.Z", "description": "Acute tonsillitis, unspecified", "attributes": {} } ] }, { "concept_id": 2554, "concept_version_id": 6508, "concept_name": "Tonsillitis Secondary care - BREATHE recommended - 1", "coding_system": { "id": 4, "name": "ICD10 codes", "description": "ICD10 Codes" }, "phenotype_id": "PH815", "phenotype_version_id": 2249, "phenotype_name": "Tonsillitis Secondary care", "code_attribute_header": [], "codes": [ { "code": "B00.2", "description": "Herpesviral gingivostomatitis and pharyngotonsillitis", "attributes": {} }, { "code": "J03", "description": "Acute tonsillitis", "attributes": {} }, { "code": "J03.0", "description": "Streptococcal tonsillitis", "attributes": {} }, { "code": "J030", "description": "Tonsillitis", "attributes": {} }, { "code": "J03.8", "description": "Acute tonsillitis due to other specified organisms", "attributes": {} }, { "code": "J038", "description": "Tonsillitis", "attributes": {} }, { "code": "J03.9", "description": "Acute tonsillitis, unspecified", "attributes": {} }, { "code": "J039", "description": "Tonsillitis", "attributes": {} } ] } ], "status": 2, "doi": "https://doi.org/10.48533/30da-mk34", "is_deleted": null, "publish_status": 2, "owner": "zinnurar", "template": { "id": 1, "name": "Clinical-Coded Phenotype", "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.", "version_id": 1 }, "versions": [ { "version_id": 2249, "version_name": "Tonsillitis Secondary care", "version_date": "2022-08-04T18:56:44.722752Z", "is_published": true, "is_latest": true }, { "version_id": 1709, "version_name": "Tonsillitis Secondary care", "version_date": "2022-01-21T07:11:27.282693Z", "is_published": true, "is_latest": false } ] } ]