[
  {
    "phenotype_id": "PH816",
    "phenotype_version_id": 2250,
    "name": "Trancheitis Primary care",
    "definition": "The aim of this research work was to identify relevant diagnosis codes available in routine electronic health records from primary and secondary care settings in the UK. We looked for relevant codes in code repositories such as the University of Cambrigdge Primary Care Unit, Manchester Clinical Codes, HDR UK National Phenomics Resource Project, Oxford-RCGP RSC, OpenSAFELY and LSHTM Data Compass. We also searched for peer-reviewed studies published  via PubMed in the last 12 months for any relevant codes. Please note that these codes are not intended to be mandatory, but are to be used as a starting point for the identification of Trancheitis in routine electronic health record. Therefore, each study may differ in the sensitivity and specificity of the coding required. \n- No validation available",
    "implementation": "\n\nNot found code search\n\n",
    "publications": [
      {
        "doi": null,
        "details": "No publications idenified via Pubmed in the last 12 months "
      }
    ],
    "validation": null,
    "citation_requirements": "",
    "created": "2022-01-21T07:11:45.673844Z",
    "author": "Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou",
    "collections": [
      {
        "name": "BREATHE",
        "value": 19
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 2,
    "updated": "2022-08-04T18:56:48.720034Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": [
      {
        "name": "CPRD Aurum",
        "value": 504,
        "uid": "1d574c14-1af0-490d-9c4e-be88cfd0e345",
        "url": "https://healthdatagateway.org/en/dataset/692",
        "datasource_id": 692
      },
      {
        "name": "Welsh Longitudinal General Practice Dataset (WLGP) - Welsh Primary Care",
        "value": 502,
        "uid": "33fc3ffd-aa4c-4a16-a32f-0c900aaea3d2",
        "url": "https://healthdatagateway.org/en/dataset/355",
        "datasource_id": 355
      },
      {
        "name": "CPRD GOLD",
        "value": 503,
        "uid": "a29feafa-7bdd-44e9-b977-c9d26425e67f",
        "url": "https://healthdatagateway.org/en/dataset/694",
        "datasource_id": 694
      }
    ],
    "coding_system": [
      {
        "name": "Read codes v2",
        "value": 5
      },
      {
        "name": "SNOMED  CT codes",
        "value": 9
      }
    ],
    "event_date_range": "01/01/2001 to 31/01/2021",
    "concept_information": [
      {
        "concept_id": 2561,
        "concept_version_id": 6522,
        "concept_name": "Trancheitis Primary care -  2",
        "coding_system": {
          "id": 9,
          "name": "SNOMED  CT codes",
          "description": "SNOMED CT codes"
        },
        "phenotype_id": "PH816",
        "phenotype_version_id": 2250,
        "phenotype_name": "Trancheitis Primary care",
        "code_attribute_header": [
          "SNOMED CT Concept ID",
          "Read v2",
          "SNOMED CT Description ID",
          "BREATHE recommended"
        ],
        "codes": [
          {
            "code": "106996011.0",
            "description": "Acute tracheitis without obstruction",
            "attributes": {
              "SNOMED CT Concept ID": "64369009",
              "Read v2": "H041000",
              "SNOMED CT Description ID": "106996011",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "107009017.0",
            "description": "Acute laryngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "64375000",
              "Read v2": "H042.00",
              "SNOMED CT Description ID": "107009017",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "1.27582010000061e+16",
            "description": "Pharyngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "195707008",
              "Read v2": "",
              "SNOMED CT Description ID": "301087010",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "13306011.0",
            "description": "Chronic tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "7457009",
              "Read v2": "H31y000",
              "SNOMED CT Description ID": "13306011",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "138105010.0",
            "description": "Chronic laryngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "83271005",
              "Read v2": "H161.00",
              "SNOMED CT Description ID": "138105010",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "15053015.0",
            "description": "Acute tracheitis with obstruction",
            "attributes": {
              "SNOMED CT Concept ID": "8519009",
              "Read v2": "H041100",
              "SNOMED CT Description ID": "15053015",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "301068016.0",
            "description": "Acute tracheitis NOS",
            "attributes": {
              "SNOMED CT Concept ID": "26650005",
              "Read v2": "H041z00",
              "SNOMED CT Description ID": "44623012",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "301074016.0",
            "description": "Acute laryngotracheitis NOS",
            "attributes": {
              "SNOMED CT Concept ID": "64375000",
              "Read v2": "H042z00",
              "SNOMED CT Description ID": "107009017",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "301082016.0",
            "description": "Acute laryngitis and tracheitis NOS",
            "attributes": {
              "SNOMED CT Concept ID": "276443001",
              "Read v2": "H04z.00",
              "SNOMED CT Description ID": "1489963015",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "301087010.0",
            "description": "Pharyngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "195707008",
              "Read v2": "H052.00",
              "SNOMED CT Description ID": "301086018",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "301241012.0",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "195810009",
              "Read v2": "H16..00",
              "SNOMED CT Description ID": "301241012",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "3313351000006110.0",
            "description": "Diphtheritic laryngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "50215002",
              "Read v2": "",
              "SNOMED CT Description ID": "83648019",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "3524071000006110.0",
            "description": "Tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "62994001",
              "Read v2": "",
              "SNOMED CT Description ID": "104710013",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "412576019.0",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "276443001",
              "Read v2": "H04..00",
              "SNOMED CT Description ID": "412576019",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "412577011.0",
            "description": "Acute laryngitis/tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "276443001",
              "Read v2": "H04..99",
              "SNOMED CT Description ID": "412577011",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "44623012.0",
            "description": "Acute tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "26650005",
              "Read v2": "H041.00",
              "SNOMED CT Description ID": "44623012",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "63301015.0",
            "description": "Acute laryngotracheitis without obstruction",
            "attributes": {
              "SNOMED CT Concept ID": "37948003",
              "Read v2": "H042000",
              "SNOMED CT Description ID": "63301015",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "91647017.0",
            "description": "Laryngotracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "55130001",
              "Read v2": "H042.11",
              "SNOMED CT Description ID": "91647017",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "989171000006116.0",
            "description": "Acute laryngitis/tracheitis",
            "attributes": {
              "SNOMED CT Concept ID": "64375000",
              "Read v2": "H042.99",
              "SNOMED CT Description ID": "989171000006116",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "99622016.0",
            "description": "Acute laryngotracheitis with obstruction",
            "attributes": {
              "SNOMED CT Concept ID": "59967003",
              "Read v2": "H042100",
              "SNOMED CT Description ID": "99622016",
              "BREATHE recommended": "Y"
            }
          }
        ]
      },
      {
        "concept_id": 2560,
        "concept_version_id": 6520,
        "concept_name": "Trancheitis Primary care -  1",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH816",
        "phenotype_version_id": 2250,
        "phenotype_name": "Trancheitis Primary care",
        "code_attribute_header": [
          "CPRD GOLD Med",
          "BREATHE recommended"
        ],
        "codes": [
          {
            "code": "H04..00",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {
              "CPRD GOLD Med": "41324",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H041.00",
            "description": "Acute tracheitis",
            "attributes": {
              "CPRD GOLD Med": "1257",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H041000",
            "description": "Acute tracheitis without obstruction",
            "attributes": {
              "CPRD GOLD Med": "12476",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H041100",
            "description": "Acute tracheitis with obstruction",
            "attributes": {
              "CPRD GOLD Med": "68867",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H041z00",
            "description": "Acute tracheitis NOS",
            "attributes": {
              "CPRD GOLD Med": "16313",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H042.00",
            "description": "Acute laryngotracheitis",
            "attributes": {
              "CPRD GOLD Med": "10087",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H042000",
            "description": "Acute laryngotracheitis without obstruction",
            "attributes": {
              "CPRD GOLD Med": "25259",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H042100",
            "description": "Acute laryngotracheitis with obstruction",
            "attributes": {
              "CPRD GOLD Med": "69898",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H042.11",
            "description": "Laryngotracheitis",
            "attributes": {
              "CPRD GOLD Med": "1285",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H042z00",
            "description": "Acute laryngotracheitis NOS",
            "attributes": {
              "CPRD GOLD Med": "24471",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H04z.00",
            "description": "Acute laryngitis and tracheitis NOS",
            "attributes": {
              "CPRD GOLD Med": "16120",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H052.00",
            "description": "Pharyngotracheitis",
            "attributes": {
              "CPRD GOLD Med": "21415",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H16..00",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {
              "CPRD GOLD Med": "11942",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H161.00",
            "description": "Chronic laryngotracheitis",
            "attributes": {
              "CPRD GOLD Med": "7318",
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "H31y000",
            "description": "Chronic tracheitis",
            "attributes": {
              "CPRD GOLD Med": "23618",
              "BREATHE recommended": "Y"
            }
          }
        ]
      },
      {
        "concept_id": 2559,
        "concept_version_id": 6518,
        "concept_name": "Trancheitis Primary care - BREATHE recommended - 2",
        "coding_system": {
          "id": 9,
          "name": "SNOMED  CT codes",
          "description": "SNOMED CT codes"
        },
        "phenotype_id": "PH816",
        "phenotype_version_id": 2250,
        "phenotype_name": "Trancheitis Primary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "106996011.0",
            "description": "Acute tracheitis without obstruction",
            "attributes": {}
          },
          {
            "code": "107009017.0",
            "description": "Acute laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "1.27582010000061e+16",
            "description": "Pharyngotracheitis",
            "attributes": {}
          },
          {
            "code": "13306011.0",
            "description": "Chronic tracheitis",
            "attributes": {}
          },
          {
            "code": "138105010.0",
            "description": "Chronic laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "15053015.0",
            "description": "Acute tracheitis with obstruction",
            "attributes": {}
          },
          {
            "code": "301068016.0",
            "description": "Acute tracheitis NOS",
            "attributes": {}
          },
          {
            "code": "301074016.0",
            "description": "Acute laryngotracheitis NOS",
            "attributes": {}
          },
          {
            "code": "301082016.0",
            "description": "Acute laryngitis and tracheitis NOS",
            "attributes": {}
          },
          {
            "code": "301087010.0",
            "description": "Pharyngotracheitis",
            "attributes": {}
          },
          {
            "code": "301241012.0",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "3313351000006110.0",
            "description": "Diphtheritic laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "3524071000006110.0",
            "description": "Tracheitis",
            "attributes": {}
          },
          {
            "code": "412576019.0",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {}
          },
          {
            "code": "412577011.0",
            "description": "Acute laryngitis/tracheitis",
            "attributes": {}
          },
          {
            "code": "44623012.0",
            "description": "Acute tracheitis",
            "attributes": {}
          },
          {
            "code": "63301015.0",
            "description": "Acute laryngotracheitis without obstruction",
            "attributes": {}
          },
          {
            "code": "91647017.0",
            "description": "Laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "989171000006116.0",
            "description": "Acute laryngitis/tracheitis",
            "attributes": {}
          },
          {
            "code": "99622016.0",
            "description": "Acute laryngotracheitis with obstruction",
            "attributes": {}
          }
        ]
      },
      {
        "concept_id": 2558,
        "concept_version_id": 6516,
        "concept_name": "Trancheitis Primary care - BREATHE recommended - 1",
        "coding_system": {
          "id": 5,
          "name": "Read codes v2",
          "description": "Read codes v2"
        },
        "phenotype_id": "PH816",
        "phenotype_version_id": 2250,
        "phenotype_name": "Trancheitis Primary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "H04..00",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {}
          },
          {
            "code": "H041.00",
            "description": "Acute tracheitis",
            "attributes": {}
          },
          {
            "code": "H041000",
            "description": "Acute tracheitis without obstruction",
            "attributes": {}
          },
          {
            "code": "H041100",
            "description": "Acute tracheitis with obstruction",
            "attributes": {}
          },
          {
            "code": "H041z00",
            "description": "Acute tracheitis NOS",
            "attributes": {}
          },
          {
            "code": "H042.00",
            "description": "Acute laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "H042000",
            "description": "Acute laryngotracheitis without obstruction",
            "attributes": {}
          },
          {
            "code": "H042100",
            "description": "Acute laryngotracheitis with obstruction",
            "attributes": {}
          },
          {
            "code": "H042.11",
            "description": "Laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "H042z00",
            "description": "Acute laryngotracheitis NOS",
            "attributes": {}
          },
          {
            "code": "H04z.00",
            "description": "Acute laryngitis and tracheitis NOS",
            "attributes": {}
          },
          {
            "code": "H052.00",
            "description": "Pharyngotracheitis",
            "attributes": {}
          },
          {
            "code": "H16..00",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "H161.00",
            "description": "Chronic laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "H31y000",
            "description": "Chronic tracheitis",
            "attributes": {}
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/m7xg-6a12",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "zinnurar",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 2250,
        "version_name": "Trancheitis Primary care",
        "version_date": "2022-08-04T18:56:48.978205Z",
        "is_published": true,
        "is_latest": true
      },
      {
        "version_id": 1711,
        "version_name": "Trancheitis Primary care",
        "version_date": "2022-01-21T07:11:45.731001Z",
        "is_published": true,
        "is_latest": false
      }
    ]
  }
]