[
  {
    "phenotype_id": "PH817",
    "phenotype_version_id": 2251,
    "name": "Trancheitis Secondary care",
    "definition": "The aim of this research work was to identify relevant diagnosis codes available in routine electronic health records from primary and secondary care settings in the UK. We looked for relevant codes in code repositories such as the University of Cambrigdge Primary Care Unit, Manchester Clinical Codes, HDR UK National Phenomics Resource Project, Oxford-RCGP RSC, OpenSAFELY and LSHTM Data Compass. We also searched for peer-reviewed studies published  via PubMed in the last 12 months for any relevant codes. Please note that these codes are not intended to be mandatory, but are to be used as a starting point for the identification of Trancheitis in routine electronic health record. Therefore, each study may differ in the sensitivity and specificity of the coding required. \n- No validation available",
    "implementation": "\n\nNot found code search\n\n",
    "publications": [
      {
        "doi": null,
        "details": "No publications idenified via Pubmed in the last 12 months "
      }
    ],
    "validation": null,
    "citation_requirements": "",
    "created": "2022-01-21T07:12:08.451057Z",
    "author": "Chukwuma Iwundu, Clare MacRae, Eleftheria Vasileiou",
    "collections": [
      {
        "name": "BREATHE",
        "value": 19
      },
      {
        "name": "Phenotype Library",
        "value": 18
      }
    ],
    "tags": null,
    "organisation": null,
    "world_access": 2,
    "updated": "2022-08-04T18:56:52.071333Z",
    "sex": [
      {
        "name": "Both",
        "value": "3"
      }
    ],
    "type": [
      {
        "name": "Disease or syndrome",
        "value": "2"
      }
    ],
    "ontology": null,
    "phenoflowid": "",
    "data_sources": [
      {
        "name": "Hospital Episode Statistics Admitted Patient Care",
        "value": 2,
        "uid": "6599230a-df54-4615-937c-d724d239491f",
        "url": "https://healthdatagateway.org/en/dataset/875",
        "datasource_id": 875
      },
      {
        "name": "Patient Episode Dataset for Wales (PEDW)",
        "value": 379,
        "uid": "4c33a5d2-164c-41d7-9797-dc2b008cc852",
        "url": "https://healthdatagateway.org/en/dataset/318",
        "datasource_id": 318
      },
      {
        "name": "Annual District Death Extract (ADDE)",
        "value": 50,
        "uid": "15cf4241-abad-4dcc-95b0-8cd7c02be999",
        "url": "https://healthdatagateway.org/en/dataset/316",
        "datasource_id": 316
      },
      {
        "name": "Civil Registration - Deaths",
        "value": 3,
        "uid": "b9009bc5-b7a6-4036-9d4b-a5133c0b14a3",
        "url": "https://healthdatagateway.org/en/dataset/877",
        "datasource_id": 877
      }
    ],
    "coding_system": [
      {
        "name": "ICD10 codes",
        "value": 4
      },
      {
        "name": "ICD11 codes",
        "value": 18
      }
    ],
    "event_date_range": "01/01/2001 to 31/01/2021",
    "concept_information": [
      {
        "concept_id": 2565,
        "concept_version_id": 6530,
        "concept_name": "Trancheitis Secondary care -  2",
        "coding_system": {
          "id": 18,
          "name": "ICD11 codes",
          "description": "ICD11 codes"
        },
        "phenotype_id": "PH817",
        "phenotype_version_id": 2251,
        "phenotype_name": "Trancheitis Secondary care",
        "code_attribute_header": [
          "BREATHE recommended"
        ],
        "codes": [
          {
            "code": "CA05.1",
            "description": "Acute tracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "CA05.2",
            "description": "Acute laryngotracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "CA05.Z",
            "description": "Acute laryngitis or tracheitis, unspecified",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "CA0G",
            "description": "Chronic laryngitis or laryngotracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          }
        ]
      },
      {
        "concept_id": 2564,
        "concept_version_id": 6528,
        "concept_name": "Trancheitis Secondary care -  1",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH817",
        "phenotype_version_id": 2251,
        "phenotype_name": "Trancheitis Secondary care",
        "code_attribute_header": [
          "BREATHE recommended"
        ],
        "codes": [
          {
            "code": "J04",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "J04.1",
            "description": "Acute tracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "J04.2",
            "description": "Acute laryngotracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "J37",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          },
          {
            "code": "J37.1",
            "description": "Chronic laryngotracheitis",
            "attributes": {
              "BREATHE recommended": "Y"
            }
          }
        ]
      },
      {
        "concept_id": 2563,
        "concept_version_id": 6526,
        "concept_name": "Trancheitis Secondary care - BREATHE recommended - 2",
        "coding_system": {
          "id": 18,
          "name": "ICD11 codes",
          "description": "ICD11 codes"
        },
        "phenotype_id": "PH817",
        "phenotype_version_id": 2251,
        "phenotype_name": "Trancheitis Secondary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "CA05.1",
            "description": "Acute tracheitis",
            "attributes": {}
          },
          {
            "code": "CA05.2",
            "description": "Acute laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "CA05.Z",
            "description": "Acute laryngitis or tracheitis, unspecified",
            "attributes": {}
          },
          {
            "code": "CA0G",
            "description": "Chronic laryngitis or laryngotracheitis",
            "attributes": {}
          }
        ]
      },
      {
        "concept_id": 2562,
        "concept_version_id": 6524,
        "concept_name": "Trancheitis Secondary care - BREATHE recommended - 1",
        "coding_system": {
          "id": 4,
          "name": "ICD10 codes",
          "description": "ICD10 Codes"
        },
        "phenotype_id": "PH817",
        "phenotype_version_id": 2251,
        "phenotype_name": "Trancheitis Secondary care",
        "code_attribute_header": [],
        "codes": [
          {
            "code": "J04",
            "description": "Acute laryngitis and tracheitis",
            "attributes": {}
          },
          {
            "code": "J04.1",
            "description": "Acute tracheitis",
            "attributes": {}
          },
          {
            "code": "J04.2",
            "description": "Acute laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "J37",
            "description": "Chronic laryngitis and laryngotracheitis",
            "attributes": {}
          },
          {
            "code": "J37.1",
            "description": "Chronic laryngotracheitis",
            "attributes": {}
          }
        ]
      }
    ],
    "status": 2,
    "doi": "https://doi.org/10.48533/c5d8-cg32",
    "is_deleted": null,
    "publish_status": 2,
    "owner": "zinnurar",
    "template": {
      "id": 1,
      "name": "Clinical-Coded Phenotype",
      "description": "Phenotype definitions that are based on lists of clinical codes, or algorithms using clinical codes.",
      "version_id": 1
    },
    "versions": [
      {
        "version_id": 2251,
        "version_name": "Trancheitis Secondary care",
        "version_date": "2022-08-04T18:56:52.300320Z",
        "is_published": true,
        "is_latest": true
      },
      {
        "version_id": 1713,
        "version_name": "Trancheitis Secondary care",
        "version_date": "2022-01-21T07:12:08.500641Z",
        "is_published": true,
        "is_latest": false
      }
    ]
  }
]