Cholangitis - Primary care

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
C1062
Version ID
3263
Coding system
Med codes
Tags /Collections
CALIBER Phenotype Library
Owner
ieuan.scanlon

Description

Publications

Primary publication DOI
10.1016/S2589-7500(19)30012-3
Primary publication link
Secondary publication link
Paper published
Source reference
Citation requirements

Clinical Code List


Name Version Type Logical type  
kuan_cholangitis_mNzDobbnJ9ssEhnW6TS2m7_Read2 - Expression Select Add codes
Code Description
25341.0 Diagnosis of Cholangitis
24866.0 Diagnosis of Cholangitis
40416.0 Diagnosis of Cholangitis
51530.0 Diagnosis of Cholangitis
15678.0 Diagnosis of Cholangitis
41470.0 Diagnosis of Cholangitis
34753.0 Diagnosis of Cholangitis
66226.0 Diagnosis of Cholangitis
97670.0 Diagnosis of Cholangitis
15425.0 Diagnosis of Cholangitis
...

Rows: 15
Code Description Disease ReadcodeDescr Readcode
10431.0 Diagnosis of Cholangitis Cholangitis Cholangitis J661.00
15425.0 Diagnosis of Cholangitis Cholangitis Primary sclerosing cholangitis J661700
15678.0 Diagnosis of Cholangitis Cholangitis Recurrent cholangitis J661200
24866.0 Diagnosis of Cholangitis Cholangitis Calculus of bile duct with cholangitis J646.00
25341.0 Diagnosis of Cholangitis Cholangitis Liver abscess due to cholangitis J620100
33339.0 Diagnosis of Cholangitis Cholangitis Other cholangitis J661y00
34753.0 Diagnosis of Cholangitis Cholangitis Ascending cholangitis J661400
35667.0 Diagnosis of Cholangitis Cholangitis Secondary sclerosing cholangitis J661800
40416.0 Diagnosis of Cholangitis Cholangitis Acute cholangitis J661000
41470.0 Diagnosis of Cholangitis Cholangitis Suppurative cholangitis J661300
44791.0 Diagnosis of Cholangitis Cholangitis Sclerosing cholangitis unspecified J661900
51530.0 Diagnosis of Cholangitis Cholangitis Chronic cholangitis J661100
64412.0 Diagnosis of Cholangitis Cholangitis Cholangitis NOS J661z00
66226.0 Diagnosis of Cholangitis Cholangitis Cholangitis lenta J661500
97670.0 Diagnosis of Cholangitis Cholangitis Obliterative cholangitis J661600

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C1062/version/3263/detail/?format=xml
JSON site_root/api/v1/public/concepts/C1062/version/3263/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C1062', '3263', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C1062/version/3263/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C1062/version/3263/export/codes/?format=json
CSV site_root/concepts/C1062/version/3263/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C1062', '3263', api_client=client)

Version History

Version
ID
Name Description Owner Publish date
3263 Cholangitis - Primary care ieuan.scanlon 2021-10-06 currently shown

Export - Export all codes into a csv file/JSON/XML for the current concept version.

Print - Print page.

Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.