Cholelithiasis - Primary care

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
C1067
Version ID
3273
Coding system
Read codes v2
Tags /Collections
CALIBER Phenotype Library
Owner
ieuan.scanlon

Description

Publications

Primary publication DOI
10.1016/S2589-7500(19)30012-3
Primary publication link
Secondary publication link
Paper published
Source reference
Citation requirements

Clinical Code List


Name Version Type Logical type  
kuan_cholelithiasis_3wyLRCS4K4nQFmsfXfi5em_Read2 - Expression Select Add codes
Code Description
14CE.00 H/O: gall stones
1965.00 Biliary colic
1965.11 Biliary colic symptom
4775.00 Faeces: gall stones present
4G21.00 O/E: cholesterol gall stone
4G22.00 O/E: pigment gall stone
4G2..00 O/E: gall stone
4G2Z.00 O/E: gall stone NOS
7648700.0 Enterotomy and removal of gallstone
8CMWD00 On gallstone care pathway
...

Rows: 54
Code Description Disease Medcode Category
14CE.00 H/O: gall stones Cholelithiasis 12140.0 History of Cholelithiasis
1965.00 Biliary colic Cholelithiasis 930.0 Diagnosis of Cholelithiasis
1965.11 Biliary colic symptom Cholelithiasis 7306.0 Diagnosis of Cholelithiasis
4775.00 Faeces: gall stones present Cholelithiasis 94302.0 Diagnosis of Cholelithiasis
4G2..00 O/E: gall stone Cholelithiasis 4429.0 Diagnosis of Cholelithiasis
4G21.00 O/E: cholesterol gall stone Cholelithiasis 61996.0 Diagnosis of Cholelithiasis
4G22.00 O/E: pigment gall stone Cholelithiasis 45836.0 Diagnosis of Cholelithiasis
4G2Z.00 O/E: gall stone NOS Cholelithiasis 42694.0 Diagnosis of Cholelithiasis
7648700.0 Enterotomy and removal of gallstone Cholelithiasis 17959.0 Procedure for Cholelithiasis
8CMWD00 On gallstone care pathway Cholelithiasis 109379.0 Diagnosis of Cholelithiasis
J503000 Gallstone ileus Cholelithiasis 29663.0 Diagnosis of Cholelithiasis
J64..00 Cholelithiasis Cholelithiasis 3599.0 Diagnosis of Cholelithiasis
J64..11 Bile duct calculus Cholelithiasis 29142.0 Diagnosis of Cholelithiasis
J64..12 Calculus - biliary Cholelithiasis 40075.0 Diagnosis of Cholelithiasis
J64..13 Cystic duct calculus Cholelithiasis 35469.0 Diagnosis of Cholelithiasis
J64..14 Gallbladder calculus Cholelithiasis 8620.0 Diagnosis of Cholelithiasis
J64..15 Gallstones Cholelithiasis 760.0 Diagnosis of Cholelithiasis
J64..16 Stone - biliary Cholelithiasis 17323.0 Diagnosis of Cholelithiasis
J640.00 Gallbladder calculus with acute cholecystitis Cholelithiasis 35046.0 Diagnosis of Cholelithiasis
J640000 Gallbladder calculus with acute cholecystitis +no obstruct Cholelithiasis 63208.0 Diagnosis of Cholelithiasis
J640100 Gallbladder calculus with acute cholecystitis + obstruction Cholelithiasis 48587.0 Diagnosis of Cholelithiasis
J640z00 Gallbladder calculus with acute cholecystitis - obst NOS Cholelithiasis 64132.0 Diagnosis of Cholelithiasis
J641.00 Gallbladder calculus with other cholecystitis Cholelithiasis 49106.0 Diagnosis of Cholelithiasis
J641000 Gallbladder calculus with other cholecystitis +no obstruct Cholelithiasis 49202.0 Diagnosis of Cholelithiasis
J641100 Gallbladder calculus with other cholecystitis + obstruct Cholelithiasis 47536.0 Diagnosis of Cholelithiasis
J641z00 Gallbladder calculus with other cholecystitis - obstruct NOS Cholelithiasis 71134.0 Diagnosis of Cholelithiasis
J642.00 Gallbladder calculus without mention of cholecystitis Cholelithiasis 12438.0 Diagnosis of Cholelithiasis
J642.11 Gallbladder calculus without mention of cholecystitis Cholelithiasis 4416.0 Diagnosis of Cholelithiasis
J642000 Gallbladder calculus without mention cholecystitis +no obstr Cholelithiasis 54853.0 Diagnosis of Cholelithiasis
J642100 Gallbladder calculus without mention cholecystitis + obstruc Cholelithiasis 61367.0 Diagnosis of Cholelithiasis
J642200 Biliary colic Cholelithiasis 6285.0 Diagnosis of Cholelithiasis
J642z00 Gallbladder calculus without cholecystitis and obstruct NOS Cholelithiasis 15602.0 Diagnosis of Cholelithiasis
J643.00 Bile duct calculus with acute cholecystitis Cholelithiasis 34683.0 Diagnosis of Cholelithiasis
J643000 Bile duct calculus + acute cholecystitis and no obstruction Cholelithiasis 39025.0 Diagnosis of Cholelithiasis
J643100 Bile duct calculus + acute cholecystitis and obstruction Cholelithiasis 31650.0 Diagnosis of Cholelithiasis
J643z00 Bile duct calculus + acute cholecystitis - obstruct NOS Cholelithiasis 96679.0 Diagnosis of Cholelithiasis
J644.00 Bile duct calculus with other cholecystitis Cholelithiasis 26889.0 Diagnosis of Cholelithiasis
J644000 Bile duct calculus + other cholecystitis and no obstruction Cholelithiasis 107004.0 Diagnosis of Cholelithiasis
J644100 Bile duct calculus + other cholecystitis and obstruction Cholelithiasis 44649.0 Diagnosis of Cholelithiasis
J644z00 Bile duct calculus + other cholecystitis - obstruction NOS Cholelithiasis 61298.0 Diagnosis of Cholelithiasis
J645.00 Bile duct calculus without mention of cholecystitis Cholelithiasis 22697.0 Diagnosis of Cholelithiasis
J645.11 Choledocholithiasis Cholelithiasis 15181.0 Diagnosis of Cholelithiasis
J645000 Bile duct calculus without cholecystitis, no obstruction Cholelithiasis 66713.0 Diagnosis of Cholelithiasis
J645100 Bile duct calculus without cholecystitis with obstruction Cholelithiasis 36879.0 Diagnosis of Cholelithiasis
J645200 Bile duct calculus NOS Cholelithiasis 8723.0 Diagnosis of Cholelithiasis
J645z00 Bile duct calculus without cholecystitis NOS Cholelithiasis 69721.0 Diagnosis of Cholelithiasis
J646.00 Calculus of bile duct with cholangitis Cholelithiasis 24866.0 Diagnosis of Cholelithiasis
J64z.00 Cholelithiasis NOS Cholelithiasis 27437.0 Diagnosis of Cholelithiasis
J64z000 Cholelithiasis without obstruction NOS Cholelithiasis 47888.0 Diagnosis of Cholelithiasis
J64z100 Cholelithiasis with obstruction NOS Cholelithiasis 62988.0 Diagnosis of Cholelithiasis
J64zz00 Cholelithiasis NOS Cholelithiasis 34063.0 Diagnosis of Cholelithiasis
J670500 Gallstone acute pancreatitis Cholelithiasis 12316.0 Diagnosis of Cholelithiasis
J671100 Gallstone chronic pancreatitis Cholelithiasis 42278.0 Diagnosis of Cholelithiasis
Jyu8000 [X]Other cholelithiasis Cholelithiasis 96795.0 Diagnosis of Cholelithiasis

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C1067/version/3273/detail/?format=xml
JSON site_root/api/v1/public/concepts/C1067/version/3273/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C1067', '3273', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C1067/version/3273/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C1067/version/3273/export/codes/?format=json
CSV site_root/concepts/C1067/version/3273/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C1067', '3273', api_client=client)

Version History

Version
ID
Name Description Owner Publish date
3273 Cholelithiasis - Primary care ieuan.scanlon 2021-10-06 currently shown

Export - Export all codes into a csv file/JSON/XML for the current concept version.

Print - Print page.

Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.