Chronic viral hepatitis - Primary care

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
C1073
Version ID
3285
Coding system
Read codes v2
Tags /Collections
CALIBER Phenotype Library
Owner
ieuan.scanlon

Description

Publications

Primary publication DOI
10.1016/S2589-7500(19)30012-3
Primary publication link
Secondary publication link
Paper published
Source reference
Citation requirements

Clinical Code List


Name Version Type Logical type  
kuan_chr_hep_Ue8m4voQcHGgTrx2sQWfeS_Read2 - Expression Select Add codes
Code Description
141E.00 History of hepatitis B
14i..00 H/O hepatitis C antiviral drug therapy
2126700.0 Hepatitis C resolved
43B4.00 Hepatitis B surface antig +ve
43B5.00 Hepatitis e antigen present
43j5.00 Hepatitis C nucleic acid detection
43jG.00 Hepatitis B nucleic acid detection
43X3.00 Hepatitis C antibody test positive
4J3B.00 Hepatitis C viral load
4J3D.00 Hepatitis B viral load
...

Rows: 40
Code Description Disease Medcode Category
141E.00 History of hepatitis B Chronic viral hepatitis 30729.0 History of Chronic viral hepatitis
14i..00 H/O hepatitis C antiviral drug therapy Chronic viral hepatitis 104277.0 History of Chronic viral hepatitis
2126700.0 Hepatitis C resolved Chronic viral hepatitis 102372.0 History of Chronic viral hepatitis
43B4.00 Hepatitis B surface antig +ve Chronic viral hepatitis 27175.0 Diagnosis of Chronic viral hepatitis
43B5.00 Hepatitis e antigen present Chronic viral hepatitis 27174.0 Diagnosis of Chronic viral hepatitis
43X3.00 Hepatitis C antibody test positive Chronic viral hepatitis 28568.0 Diagnosis of Chronic viral hepatitis
43j5.00 Hepatitis C nucleic acid detection Chronic viral hepatitis 27191.0 Diagnosis of Chronic viral hepatitis
43jG.00 Hepatitis B nucleic acid detection Chronic viral hepatitis 33316.0 Diagnosis of Chronic viral hepatitis
4J3B.00 Hepatitis C viral load Chronic viral hepatitis 30884.0 Diagnosis of Chronic viral hepatitis
4J3D.00 Hepatitis B viral load Chronic viral hepatitis 56066.0 Diagnosis of Chronic viral hepatitis
4JQ3.00 Hepatitis C virus genotype Chronic viral hepatitis 35589.0 Diagnosis of Chronic viral hepatitis
4JQD.00 Hepatitis C viral ribonucleic acid PCR positive Chronic viral hepatitis 102568.0 Diagnosis of Chronic viral hepatitis
4JQD.11 Hepatitis C PCR positive Chronic viral hepatitis 102565.0 Diagnosis of Chronic viral hepatitis
4JQF.00 Hepatitis C antigen positive Chronic viral hepatitis 104243.0 Diagnosis of Chronic viral hepatitis
7Q05200 Hepatitis B treatment drugs Band 1 Chronic viral hepatitis 100834.0 Diagnosis of Chronic viral hepatitis
8BB5.00 12 week virologic response to hepatitis C treatment Chronic viral hepatitis 110411.0 Diagnosis of Chronic viral hepatitis
9NgR.00 On hepatitis C treatment plan Chronic viral hepatitis 104572.0 Diagnosis of Chronic viral hepatitis
9kR..00 Chronic hepatitis annual review - enhanced services admin Chronic viral hepatitis 99898.0 History of Chronic viral hepatitis
9kV..00 Hepatitis C screening positive - enhanced services admin Chronic viral hepatitis 96085.0 Diagnosis of Chronic viral hepatitis
9kV..11 Hepatitis C screening positive Chronic viral hepatitis 98903.0 Diagnosis of Chronic viral hepatitis
9kX..00 Hepatitis status 6 months post treatment - enhanced serv adm Chronic viral hepatitis 103362.0 History of Chronic viral hepatitis
9kZ..00 Hepatitis B screening positive - enhanced services admin Chronic viral hepatitis 95926.0 Diagnosis of Chronic viral hepatitis
9kZ..11 Hepatitis B screening positive Chronic viral hepatitis 97735.0 Diagnosis of Chronic viral hepatitis
A703.00 Viral (serum) hepatitis B Chronic viral hepatitis 2860.0 Diagnosis of Chronic viral hepatitis
A705000 Viral hepatitis C without mention of hepatic coma Chronic viral hepatitis 2834.0 Diagnosis of Chronic viral hepatitis
A705100 Acute delta-(super)infection of hepatitis B carrier Chronic viral hepatitis 32657.0 Diagnosis of Chronic viral hepatitis
A707.00 Chronic viral hepatitis Chronic viral hepatitis 26367.0 Diagnosis of Chronic viral hepatitis
A707000 Chronic viral hepatitis B with delta-agent Chronic viral hepatitis 24813.0 Diagnosis of Chronic viral hepatitis
A707100 Chronic viral hepatitis B without delta-agent Chronic viral hepatitis 41096.0 Diagnosis of Chronic viral hepatitis
A707200 Chronic viral hepatitis C Chronic viral hepatitis 30586.0 Diagnosis of Chronic viral hepatitis
A707300 Chronic viral hepatitis B Chronic viral hepatitis 106642.0 Diagnosis of Chronic viral hepatitis
A707X00 Chronic viral hepatitis, unspecified Chronic viral hepatitis 32277.0 Diagnosis of Chronic viral hepatitis
A70A.00 Hepatitis C genotype 1 Chronic viral hepatitis 104341.0 Diagnosis of Chronic viral hepatitis
A70B.00 Hepatitis C genotype 2 Chronic viral hepatitis 105664.0 Diagnosis of Chronic viral hepatitis
A70C.00 Hepatitis C genotype 3 Chronic viral hepatitis 104346.0 Diagnosis of Chronic viral hepatitis
A70D.00 Hepatitis C genotype 4 Chronic viral hepatitis 104892.0 Diagnosis of Chronic viral hepatitis
A70z000 Hepatitis C Chronic viral hepatitis 2413.0 Diagnosis of Chronic viral hepatitis
AyuB100 [X]Other chronic viral hepatitis Chronic viral hepatitis 108343.0 Diagnosis of Chronic viral hepatitis
AyuB200 [X]Chronic viral hepatitis, unspecified Chronic viral hepatitis 107896.0 Diagnosis of Chronic viral hepatitis
Q409100 Congenital hepatitis B infection Chronic viral hepatitis 50245.0 Diagnosis of Chronic viral hepatitis

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C1073/version/3285/detail/?format=xml
JSON site_root/api/v1/public/concepts/C1073/version/3285/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C1073', '3285', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C1073/version/3285/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C1073/version/3285/export/codes/?format=json
CSV site_root/concepts/C1073/version/3285/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C1073', '3285', api_client=client)

Version History

Version
ID
Name Description Owner Publish date
3285 Chronic viral hepatitis - Primary care ieuan.scanlon 2021-10-06 currently shown

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Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.