Carcinoma in situ_cervical - Primary care

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
C1079
Version ID
3297
Coding system
Read codes v2
Tags /Collections
CALIBER Phenotype Library
Owner
ieuan.scanlon

Description

Publications

Primary publication DOI
10.1016/S2589-7500(19)30012-3
Primary publication link
Secondary publication link
Paper published
Source reference
Citation requirements

Clinical Code List


Name Version Type Logical type  
kuan_cin_cervical_mMCP3dUk9Swip6ZHeCvz4m_Read2 - Expression Select Add codes
Code Description
4K2..11 Dyskaryosis on cervical smear
4K2J.00 Cervical smear - low grade dyskaryosis
4K2K.00 Cervical smear - high grade dyskaryosis (moderate)
4K2L.00 Cervical smear - high grade dyskaryosis (severe)
4K2N.00 Cervical smear - ?endocervical type glandular neoplasia
4K2P.00 Cervical smear - ?non-cervical type glandular neoplasia
B831000 Carcinoma in situ of endocervix
B831100 Carcinoma in situ of exocervix
B831.00 Carcinoma in situ of cervix uteri
B831.11 CIN III - carcinoma in situ of cervix
...

Rows: 30
Code Description Disease Medcode Category
4K2..11 Dyskaryosis on cervical smear Carcinoma in situ_cervical 7610.0 Diagnosis of Carcinoma in situ_cervical
4K2J.00 Cervical smear - low grade dyskaryosis Carcinoma in situ_cervical 107295.0 Diagnosis of Carcinoma in situ_cervical
4K2K.00 Cervical smear - high grade dyskaryosis (moderate) Carcinoma in situ_cervical 107363.0 Diagnosis of Carcinoma in situ_cervical
4K2L.00 Cervical smear - high grade dyskaryosis (severe) Carcinoma in situ_cervical 107264.0 Diagnosis of Carcinoma in situ_cervical
4K2N.00 Cervical smear - ?endocervical type glandular neoplasia Carcinoma in situ_cervical 107497.0 Diagnosis of Carcinoma in situ_cervical
4K2P.00 Cervical smear - ?non-cervical type glandular neoplasia Carcinoma in situ_cervical 107348.0 Diagnosis of Carcinoma in situ_cervical
B831.00 Carcinoma in situ of cervix uteri Carcinoma in situ_cervical 3279.0 Diagnosis of Carcinoma in situ_cervical
B831.11 CIN III - carcinoma in situ of cervix Carcinoma in situ_cervical 4087.0 Diagnosis of Carcinoma in situ_cervical
B831.12 Cervical intraepithelial neoplasia Carcinoma in situ_cervical 5295.0 Diagnosis of Carcinoma in situ_cervical
B831.13 Cervical intraepithelial neoplasia grade III Carcinoma in situ_cervical 21886.0 Diagnosis of Carcinoma in situ_cervical
B831000 Carcinoma in situ of endocervix Carcinoma in situ_cervical 24228.0 Diagnosis of Carcinoma in situ_cervical
B831100 Carcinoma in situ of exocervix Carcinoma in situ_cervical 50126.0 Diagnosis of Carcinoma in situ_cervical
ByuFA00 [X]Carcinoma in situ of other parts of cervix Carcinoma in situ_cervical 72695.0 Diagnosis of Carcinoma in situ_cervical
K551.00 Dysplasia of cervix uteri Carcinoma in situ_cervical 1910.0 Diagnosis of Carcinoma in situ_cervical
K551.12 CIN I - II, cervical dysplasia Carcinoma in situ_cervical 16859.0 Diagnosis of Carcinoma in situ_cervical
K551000 Anaplasia of cervix Carcinoma in situ_cervical 63477.0 Diagnosis of Carcinoma in situ_cervical
K551100 Epidermidization of cervix Carcinoma in situ_cervical 107831.0 Diagnosis of Carcinoma in situ_cervical
K551300 Mild cervical dysplasia Carcinoma in situ_cervical 9184.0 Diagnosis of Carcinoma in situ_cervical
K551311 Cervical intraepithelial neoplasia grade I Carcinoma in situ_cervical 8226.0 Diagnosis of Carcinoma in situ_cervical
K551400 Moderate cervical dysplasia Carcinoma in situ_cervical 22037.0 Diagnosis of Carcinoma in situ_cervical
K551411 Cervical intraepithelial neoplasia grade II Carcinoma in situ_cervical 22493.0 Diagnosis of Carcinoma in situ_cervical
K551X00 Severe cervical dysplasia, not elsewhere classified Carcinoma in situ_cervical 20602.0 Diagnosis of Carcinoma in situ_cervical
K551z00 Dysplasia of cervix NOS Carcinoma in situ_cervical 12913.0 Diagnosis of Carcinoma in situ_cervical
R150000 [D]Dyskaryotic cervical smear Carcinoma in situ_cervical 5446.0 Diagnosis of Carcinoma in situ_cervical
ZV13B00 [V]Personal history of mild cervical dysplasia Carcinoma in situ_cervical 64005.0 History of Carcinoma in situ_cervical
ZV13B11 [V]PH of cervical intraepithelial neoplasia, grade I Carcinoma in situ_cervical 61148.0 History of Carcinoma in situ_cervical
ZV13C00 [V]Personal history of moderate cervical dysplasia Carcinoma in situ_cervical 32449.0 History of Carcinoma in situ_cervical
ZV13C11 [V]PH of cervical intraepithelial neoplasia grade II Carcinoma in situ_cervical 30366.0 History of Carcinoma in situ_cervical
ZV13D00 [V]Personal history of severe cervical dysplasia Carcinoma in situ_cervical 42853.0 History of Carcinoma in situ_cervical
ZV13E00 [V]PH of cervical intraepithelial neoplasia, grade III Carcinoma in situ_cervical 28613.0 History of Carcinoma in situ_cervical

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C1079/version/3297/detail/?format=xml
JSON site_root/api/v1/public/concepts/C1079/version/3297/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C1079', '3297', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C1079/version/3297/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C1079/version/3297/export/codes/?format=json
CSV site_root/concepts/C1079/version/3297/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C1079', '3297', api_client=client)

Version History

Version
ID
Name Description Owner Publish date
3297 Carcinoma in situ_cervical - Primary care ieuan.scanlon 2021-10-06 currently shown

Export - Export all codes into a csv file/JSON/XML for the current concept version.

Print - Print page.

Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.