Myocardial infarction
Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A
PH215 / 430 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromeSexBothValid Event Date Range01/01/1999 - 01/07/2016Coding SystemRead codes v2Med codesICD10 codesData SourcesCollectionsCALIBERPhenotype LibraryTagsNo dataDefinition
Use MODIFIED CALIBER 'Myocardial infarction' phenotyping algorithm:
At the specified date, a patient is considered to have had a 'Myocardial infarction' IF they meet any of the criteria below on or before the specified date.
The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date.
Primary care diagnosis of MI: myo_infarct_gprd: category 1, category 2, category 3, category 4, category 5, category 6, category 7
Secondary care diagnosis of MI: myo_infarct_hes: category 1, category 5, category 6, category 7
Secondary care procedure code for coronary thrombolysis: lysis_opcs category 2
Implementation
Phenoflow IDImplementation
Clinical Code List
PUBLISHED - 70 Codes
PUBLISHED - 70 Codes
PUBLISHED - 5 Codes
Publication
Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3
(DOI:10.1016/S2589-7500(19)30012-3)
Citation Requirements
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH215/version/430/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH215',
version_id=430
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH215',
version_id=430
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH215/version/430/export/codes/?format=json CSV site_root/phenotypes/PH215/version/430/export/codes/ R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH215',
version_id=430
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH215',
version_id=430
)Version History