Concepts > Primary Malignancy_Prostate - Primary care

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Primary Malignancy_Prostate - Primary care

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

ID
C1439
Version ID
4017
Coding system
Read codes v2
Collections
CALIBER Phenotype Library
Tags
No tags
Owner
ieuan.scanlon

Description

No data available

Publications

Primary publication DOI
10.1016/S2589-7500(19)30012-3
Primary publication link
No data available
Secondary publication link
No data available
Paper published
Published ✔
Source reference
No data available
Citation requirements
No data available

Clinical Code List


Name Version Type Logical type  
kuan_pri_prost_K7iZUPXVXQqcHj5BS4sChz_Read2 - Expression Select Add codes
Code Description
1427000.0 H/O: prostate cancer
4M00.00 Gleason prostate grade 2-4 (low)
4M01.00 Gleason prostate grade 5-7 (medium)
4M02.00 Gleason prostate grade 8-10 (high)
4M0..00 Gleason grading of prostate cancer
7B20000 Radical cystoprostatourethrectomy
7B20200 Radical cystoprostatectomy
7B36000 Radical prostatectomy - unspecified excision of pelvic nodes
7B36500 Radical prostatectomy without pelvic node excision
7B36600 Radical prostatectomy with pelvic node sampling
...

Rows: 13
Code Description Disease Medcode Category
1427000.0 H/O: prostate cancer Primary Malignancy_Prostate 102314.0 History of Primary Malignancy_Prostate
4M0..00 Gleason grading of prostate cancer Primary Malignancy_Prostate 10178.0 Diagnosis of Primary Malignancy_Prostate
4M00.00 Gleason prostate grade 2-4 (low) Primary Malignancy_Prostate 18503.0 Diagnosis of Primary Malignancy_Prostate
4M01.00 Gleason prostate grade 5-7 (medium) Primary Malignancy_Prostate 18612.0 Diagnosis of Primary Malignancy_Prostate
4M02.00 Gleason prostate grade 8-10 (high) Primary Malignancy_Prostate 26081.0 Diagnosis of Primary Malignancy_Prostate
7B20000 Radical cystoprostatourethrectomy Primary Malignancy_Prostate 9541.0 Procedure for Primary Malignancy_Prostate
7B20200 Radical cystoprostatectomy Primary Malignancy_Prostate 10633.0 Procedure for Primary Malignancy_Prostate
7B36000 Radical prostatectomy - unspecified excision of pelvic nodes Primary Malignancy_Prostate 4997.0 Procedure for Primary Malignancy_Prostate
7B36500 Radical prostatectomy without pelvic node excision Primary Malignancy_Prostate 12593.0 Procedure for Primary Malignancy_Prostate
7B36600 Radical prostatectomy with pelvic node sampling Primary Malignancy_Prostate 11492.0 Procedure for Primary Malignancy_Prostate
7B36700 Radical prostatectomy with pelvic lymphadenectomy Primary Malignancy_Prostate 9533.0 Procedure for Primary Malignancy_Prostate
B46..00 Malignant neoplasm of prostate Primary Malignancy_Prostate 780.0 Diagnosis of Primary Malignancy_Prostate
ZV10415 [V]Personal history of malignant neoplasm of prostate Primary Malignancy_Prostate 37306.0 History of Primary Malignancy_Prostate

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C1439/version/4017/detail/?format=xml
JSON site_root/api/v1/public/concepts/C1439/version/4017/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C1439', '4017', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C1439/version/4017/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C1439/version/4017/export/codes/?format=json
CSV site_root/concepts/C1439/version/4017/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C1439', '4017', api_client=client)

Version History

Version
ID		 Name Owner Publish date
4017 Primary Malignancy_Prostate - Primary care ieuan.scanlon 2021-10-06 currently shown

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Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.