CCU002_01 Depression

Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne

PH964 / 2142 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Phenotype UUID
    ZkGaJXnvuuoToUxpCKrQuk
    Sex
    Both
    Valid Event Date Range
    01/01/1997 - 07/12/2020
    Coding System
    Read codes v2ICD10 codesSNOMED CT codes
    Data Sources
    GPES Data for Pandemic Planning and Research (COVID-19), Hospital Episode Statistics Admitted Patient Care, Covid-19 Second Generation Surveillance System, Civil Registration - Deaths, Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT, COVID-19 Test Results (PATD), Welsh Longitudinal GP Dataset - Welsh Primary Care (WLGP), Patient Episode Dataset for Wales (PEDW), Secondary Uses Services Payment By Results
    Collections
    BHF Data Science CentrePhenotype Library
    Tags
    No data

  2. Definition

  3. Implementation

    Implementation

    No data

  4. Clinical Code List

  5. Publication

    • Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne, for the CVD-COVID-UK/COVID-IMPACT consortium and th

    Citation Example

    Rochelle Knight, Venexia Walker, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Rachel Denholm, Ashley Akbari, Hoda Abbasizanjani, Fatemeh Torabi, Efosa Omigie, Sam Hollings, Teri-Louise North, Renin Toms, Emanuele Di Angelantonio, Spiros Denaxas, Johan H Thygesen, Christopher Tomlinson, Ben Bray, Craig J Smith, Mark Barber, George Davey Smith, Nishi Chaturvedi, Cathie Sudlow, William N Whiteley, Angela Wood, Jonathan A C Sterne. PH964 / 2142 - CCU002_01 Depression. Phenotype Library [Online]. 17 May 2022. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH964/version/2142/detail/. [Accessed 26 April 2024]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH964/version/2142/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH964',
     version_id=2142
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH964',
     version_id=2142
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH964/version/2142/export/codes/?format=json
    CSV site_root/phenotypes/PH964/version/2142/export/codes/
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH964',
     version_id=2142
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH964',
     version_id=2142
    )

  7. Version History

    Version IDNameOwnerPublish date
    2142 CCU002_01 Depression ieuan.scanlon2022-05-17currently shown
    2007 CCU002_01 Depression ieuan.scanlon2022-05-09