COPD - UK Biobank

Eleanor L Axson, Jennifer K Quint

ID
C729
Version ID
2597
Coding system
UKBioBank codes
Tags /Collections
BREATHE Phenotype Library
Owner
ieuan.scanlon

Description

Publications

Primary publication DOI
Primary publication link
Secondary publication link
Paper published
Source reference
Citation requirements

Clinical Code List


Name Version Type Logical type  
axson_COPD_Y9JxuQRFPprJDMHSPowJYs_UKBIOBANK - Expression Select Add codes
Code Description
1112 Chronic obstructive airways disease/COPD
1113 Emphysema/chronic bronchitis
1472 Emphysema
...

Rows: 3
Code Description Field
1112 Chronic obstructive airways disease/COPD 20002
1113 Emphysema/chronic bronchitis 20002
1472 Emphysema 20002

API

To Export Concept Details:

Format API
XML site_root/api/v1/public/concepts/C729/version/2597/detail/?format=xml
JSON site_root/api/v1/public/concepts/C729/version/2597/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of concept

details = get_concept_detail_by_version('C729', '2597', api_client=client)

To Export Concept Code List:

Format API
XML site_root/api/v1/public/concepts/C729/version/2597/export/codes/?format=xml
JSON site_root/api/v1/public/concepts/C729/version/2597/export/codes/?format=json
CSV site_root/concepts/C729/version/2597/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelist of concept

codelist = get_concept_code_list_by_version('C729', '2597', api_client=client)

Version History

Version
ID
Name Description Owner Publish date
2597 COPD - UK Biobank ieuan.scanlon 2021-10-06 currently shown

Export - Export all codes into a csv file/JSON/XML for the current concept version.

Print - Print page.

Components are individual rules matching a set of codes. One or more components are used to define the codes contained within a concept.