Abdominal aortic aneurysm
Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A
PH34 / 68 Clinical-Coded Phenotype
Overview
Phenotype TypeDisease or syndromeSexBothValid Event Date Range01/01/1999 - 01/07/2016Coding SystemRead codes v2Med codesICD10 codesData SourcesCollectionsCALIBERPhenotype LibraryTagsNo dataDefinition
Use MODIFIED CALIBER 'Abdominal aortic aneurysm' phenotyping algorithm:
At the specified date, a patient is considered to have an 'Abdominal aortic aneurysm' IF they meet any of the criteria below on or before the specified date.
The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:
Primary care
Diagnosis of AAA during a consultation: arterial_gprd: category 4
Performance of emergency AAA repair procedure recording during a consultation: aaa_ops_gprd: category 3
History of AAA during a consultation. The following Read code from CPRD:
Read:14AE.00 Medcode:16993 Descr:H/O: aortic aneurysm
Secondary care
Diagnosis of AAA as the primary or secondary diagnosis of any hospitalization: arterial_hes: category 4
Performance of emergency AAA repair procedure recorded: aaa_ops_opcs: category 3
Implementation
Phenoflow IDImplementation
Clinical Code List
PUBLISHED - 15 Codes
PUBLISHED - 15 Codes
PUBLISHED - 3 Codes
Publication
Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3
(DOI:10.1016/S2589-7500(19)30012-3)
Citation Requirements
API
To Export Phenotype Details:
Format API JSON site_root/api/v1/phenotypes/PH34/version/68/detail/?format=json R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get details of phenotype
phenotype_details = client$phenotypes$get_detail(
'PH34',
version_id=68
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_detail(
'PH34',
version_id=68
)To Export Phenotype Code List:
Format API JSON site_root/api/v1/phenotypes/PH34/version/68/export/codes/?format=json CSV site_root/phenotypes/PH34/version/68/export/codes/ R Package library(ConceptLibraryClient)
# Connect to API
client = ConceptLibraryClient::Connection$new(public=TRUE)
# Get codelist of phenotype
phenotype_codelist = client$phenotypes$get_codelist(
'PH34',
version_id=68
)Py Package from pyconceptlibraryclient import Client
# Connect to API
client = Client(public=True)
# Get codelist of phenotype
phenotype_codelist = client.phenotypes.get_codelist(
'PH34',
version_id=68
)Version History