Phenotypes > CCU002_02 Dementia

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CCU002_02 Dementia

CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow

ID
PH1004
Version ID
2182
Type
Disease or Syndrome
Data Sources
GPES Data for Pandemic Planning and Research (COVID-19) , Hospital Episode Statistics Admitted Patient Care , Civil Registration - Deaths , Trusted Research Environments for CVD-COVID-UK / COVID-IMPACT , Secondary Uses Services Payment By Results
Valid event data range
08/12/2020 - 18/03/2021
Sex
♀  Female ♂  Male
Agreement Date
2021-08-23
Coding system
ICD10 codes SNOMED CT codes
Collections
BHF Data Science Centre Phenotype Library
Tags
No tags

Definition

Code type is set to 1 for incident events, and 0 for prevalent events.

Publications

  • Association of COVID-19 vaccines ChAdOx1 and BNT162b2 with major venous, arterial, and thrombocytopenic events: whole population cohort study in 46 million adults in England CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow medRxiv 2021.08.18.21262222; doi: https://doi.org/10.1

Clinical Code List

Expand All  /  Collapse All
Rows: 4
Code Description terminology code_type
F00 Dementia in Alzheimer's disease ICD10 1.0
F03 Unspecified dementia ICD10 1.0
F05.1 Delirium superimposed on dementia ICD10 1.0
G30 Alzheimer's disease ICD10 1.0
Rows: 79
Code Description terminology code_type
101421000119107 Dementia due to Parkinson's disease (disorder) SNOMEDCT 1.0
1089521000000106 Predominantly cortical dementia (disorder) SNOMEDCT 1.0
1095101000000106 Offer of dementia advance care planning review declined (situation) SNOMEDCT 1.0
1095111000000108 Review of dementia advance care plan (procedure) SNOMEDCT 1.0
1095121000000102 Dementia advance care plan agreed (finding) SNOMEDCT 1.0
1110901000000109 Quality and Outcomes Framework dementia quality indicator-related care invitation (procedure) SNOMEDCT 1.0
12348006 Presenile dementia SNOMEDCT 1.0
13092008 Pick's disease SNOMEDCT 1.0
135811000119107 Lewy body dementia with behavioral disturbance (disorder) SNOMEDCT 1.0
142001000119106 Depressed mood in Alzheimer's disease (disorder) SNOMEDCT 1.0
15662003 Senile dementia SNOMEDCT 1.0
191449005 Uncomplicated senile dementia SNOMEDCT 1.0
191451009 Uncomplicated presenile dementia SNOMEDCT 1.0
191452002 Presenile dementia with delirium SNOMEDCT 1.0
191454001 Presenile dementia with paranoia SNOMEDCT 1.0
191455000 Presenile dementia with depression SNOMEDCT 1.0
191457008 Senile dementia with depressive or paranoid features SNOMEDCT 1.0
191458003 Senile dementia with paranoia SNOMEDCT 1.0
191459006 Senile dementia with depression SNOMEDCT 1.0
191461002 Senile dementia with delirium SNOMEDCT 1.0
191493005 Drug-induced dementia (disorder) SNOMEDCT 1.0
191519005 Dementia in conditions EC SNOMEDCT 1.0
20484008 Prion disease SNOMEDCT 1.0
21921000119103 Dementia due to Pick's disease SNOMEDCT 1.0
22381000119105 Primary degenerative dementia SNOMEDCT 1.0
230265002 Familial Alzheimer's disease of early onset SNOMEDCT 1.0
230266001 Non-familial Alzheimer's disease of early onset SNOMEDCT 1.0
230267005 Familial Alzheimer's disease of late onset SNOMEDCT 1.0
230268000 Non-familial Alzheimer's disease of late onset SNOMEDCT 1.0
230269008 Focal Alzheimer's disease SNOMEDCT 1.0
230270009 Frontotemporal dementia (disorder) SNOMEDCT 1.0
230271008 Pick's disease with Pick bodies (disorder) SNOMEDCT 1.0
230273006 Frontotemporal degeneration (disorder) SNOMEDCT 1.0
230274000 Frontal lobe degeneration with motor neurone disease (disorder) SNOMEDCT 1.0
230280008 Progressive aphasia in Alzheimer's disease SNOMEDCT 1.0
230282000 Post-traumatic dementia (disorder) SNOMEDCT 1.0
230283005 Punch drunk syndrome (disorder) SNOMEDCT 1.0
230284004 Spongiform encephalopathy SNOMEDCT 1.0
230287006 Mixed cortical and subcortical vascular dementia SNOMEDCT 1.0
230288001 Semantic dementia (disorder) SNOMEDCT 1.0
230289009 Patchy dementia (disorder) SNOMEDCT 1.0
26929004 Alzheimer's disease SNOMEDCT 1.0
278855005 Frontal lobe degeneration (disorder) SNOMEDCT 1.0
278857002 Dementia of frontal lobe type (disorder) SNOMEDCT 1.0
279982005 Cerebral degeneration presenting primarily with dementia SNOMEDCT 1.0
281004 Dementia associated with alcoholism SNOMEDCT 1.0
304603007 New variant of Creutzfeldt-Jakob disease SNOMEDCT 1.0
312991009 Senile dementia of the Lewy body type SNOMEDCT 1.0
416780008 Primary degenerative dementia of the Alzheimer type, presenile onset (disorder) SNOMEDCT 1.0
416975007 Primary degenerative dementia of the Alzheimer type, senile onset (disorder) SNOMEDCT 1.0
419261000000107 [X]Dementia in Alzheimer's dis, atypical or mixed type (disorder) SNOMEDCT 1.0
425390006 Dementia associated with Parkinson's Disease (disorder) SNOMEDCT 1.0
429458009 Dementia due to Creutzfeldt Jakob disease (disorder) SNOMEDCT 1.0
442344002 Dementia due to Huntington chorea SNOMEDCT 1.0
45864009 Senile degeneration of brain (disorder) SNOMEDCT 1.0
52448006 Dementia SNOMEDCT 1.0
62239001 Parkinson-dementia complex of Guam (disorder) SNOMEDCT 1.0
66108005 Primary degenerative dementia of the Alzheimer type, senile onset, uncomplicated SNOMEDCT 1.0
67155006 Gerstmann-Straussler-Scheinker syndrome SNOMEDCT 1.0
698626001 Dementia associated with multiple sclerosis (disorder) SNOMEDCT 1.0
711441000000100 Dementia monitoring invitation (procedure) SNOMEDCT 1.0
713060000 Sporadic Creutzfeldt-Jakob disease (disorder) SNOMEDCT 1.0
715821000000107 Dementia monitoring first letter (procedure) SNOMEDCT 1.0
716221000000104 Dementia monitoring verbal invitation (procedure) SNOMEDCT 1.0
716671000000102 Dementia monitoring third letter (procedure) SNOMEDCT 1.0
716991000000108 Dementia monitoring telephone invitation (procedure) SNOMEDCT 1.0
717471000000101 Dementia monitoring second letter (procedure) SNOMEDCT 1.0
723390000 Rapidly progressive dementia (disorder) SNOMEDCT 1.0
792004 Jakob-Creutzfeldt disease SNOMEDCT 1.0
79341000119107 Mixed dementia (disorder) SNOMEDCT 1.0
80098002 Diffuse Lewy body disease SNOMEDCT 1.0
83157008 Fatal familial insomnia SNOMEDCT 1.0
9345005 Dialysis dementia (disorder) SNOMEDCT 1.0
938551000000108 Dementia medication review (procedure) SNOMEDCT 1.0
956841000000106 Dementia care plan agreed (finding) SNOMEDCT 1.0
956861000000107 Dementia care plan reviewed (situation) SNOMEDCT 1.0
956881000000103 Dementia care plan declined (situation) SNOMEDCT 1.0
956901000000100 Dementia care plan review declined (situation) SNOMEDCT 1.0
959461000000102 Dementia advance care plan review declined (situation) SNOMEDCT 1.0
Rows: 1
Code Description terminology code_type
F01 Vascular dementia ICD10 1.0
Rows: 12
Code Description terminology code_type
10349009 Multi-infarct dementia with delirium (disorder) SNOMEDCT 1.0
16276361000119109 Vascular dementia without behavioral disturbance (disorder) SNOMEDCT 1.0
191463004 Uncomplicated arteriosclerotic dementia SNOMEDCT 1.0
191464005 Arteriosclerotic dementia with delirium SNOMEDCT 1.0
191465006 Arteriosclerotic dementia with paranoia SNOMEDCT 1.0
191466007 Arteriosclerotic dementia with depression SNOMEDCT 1.0
230285003 Vascular dementia of acute onset SNOMEDCT 1.0
230286002 Subcortical vascular dementia SNOMEDCT 1.0
288631000119104 Vascular dementia with behavioral disturbance (disorder) SNOMEDCT 1.0
429998004 Vascular dementia (disorder) SNOMEDCT 1.0
56267009 Multi-infarct dementia SNOMEDCT 1.0
723123001 Ischemic vascular dementia (disorder) SNOMEDCT 1.0

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH1004/version/2182/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1004/version/2182/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH1004', '2182', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH1004/version/2182/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1004/version/2182/export/codes/?format=json
CSV site_root/phenotypes/PH1004/version/2182/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH1004', '2182', api_client=client)

Version History

Version
ID		 Name Owner Publish date
2182 CCU002_02 Dementia ieuan.scanlon 2022-05-17 currently shown
2087 CCU002_02 Dementia ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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