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CCU002_02 Peripheral arterial disease (PAD)

CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow

ID
PH1016
Version ID
2194
Type
Disease or Syndrome
Valid event data range
08/12/2020 - 18/03/2021
Sex
♀  Female ♂  Male
Agreement Date
2021-08-23
Coding system
SNOMED CT codes
Collections
BHF Data Science Centre Phenotype Library
Tags
No tags

Definition

Code type is set to 1 for incident events, and 0 for prevalent events.

Publications

  • Association of COVID-19 vaccines ChAdOx1 and BNT162b2 with major venous, arterial, and thrombocytopenic events: whole population cohort study in 46 million adults in England CVD-COVID-UK consortium, William N Whiteley, Samantha Ip, Jennifer A Cooper, Thomas Bolton, Spencer Keene, Venexia Walker, Rachel Denholm, Ashley Akbari, Efosa Omigie, Sam Hollings, Emanuele Di Angelantonio, Spiros Denaxas, Angela Wood, Jonathan A C Sterne, Cathie Sudlow medRxiv 2021.08.18.21262222; doi: https://doi.org/10.1

Clinical Code List

Rows: 17
Code Description terminology code_type
127014009 Diabetic peripheral angiopathy SNOMEDCT 1.0
201250006 Ischaemic ulcer diabetic foot SNOMEDCT 1.0
233958001 Peripheral ischaemia SNOMEDCT 1.0
233961000 Lower limb ischemia SNOMEDCT 1.0
275520000 Claudication SNOMEDCT 1.0
301755001 Ischemic foot SNOMEDCT 1.0
307408003 Ischaemic toe SNOMEDCT 1.0
31211000119101 Peripheral vascular disease due to type I diabetes SNOMEDCT 1.0
314902007 Type II diabetes mellitus with peripheral angiopathy SNOMEDCT 1.0
399957001 Peripheral arterial occlusive disease (disorder) SNOMEDCT 1.0
400047006 Peripheral vascular disease (disorder) SNOMEDCT 1.0
421365002 Peripheral circulatory disorder associated with type I diabetes mellitus (disorder) SNOMEDCT 1.0
421895002 Peripheral circulatory disorder associated with diabetes mellitus (disorder) SNOMEDCT 1.0
422166005 Peripheral circulatory disorder associated with type II diabetes mellitus (disorder) SNOMEDCT 1.0
422275004 Gangrene associated with diabetes mellitus (disorder) SNOMEDCT 1.0
63491006 Intermittent claudication SNOMEDCT 1.0
836711000000108 Ischaemic lower limb pain at rest (finding) SNOMEDCT 1.0

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH1016/version/2194/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1016/version/2194/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH1016', '2194', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH1016/version/2194/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1016/version/2194/export/codes/?format=json
CSV site_root/phenotypes/PH1016/version/2194/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH1016', '2194', api_client=client)

Version History

Version
ID
Name Owner Publish date
2194 CCU002_02 Peripheral arterial disease (PAD) ieuan.scanlon 2022-05-17 currently shown
2111 CCU002_02 Peripheral arterial disease (PAD) ieuan.scanlon 2022-05-09

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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