Phenotype Library | phenotype: Blood loss anaemia

Blood loss anaemia - Elixhauser primary care

David Metcalfe, James Masters, Antonella Delmestri, Andrew Judge, Daniel Perry, Cheryl Zogg, Belinda Gabbe, Matthew Costa

PH1070

Version ID

2343

Type

Disease or Syndrome

Data Sources

Sex

♀ Female ♂ Male

Agreement Date

20/05/2019

Coding system

Read codes v2

Collections

Phenotype Library

Blood loss anaemia comorbidity category for Elixhauser index, defined in Read codes for primary care by David Metcalfe et. al.

Metcalfe, D., Masters, J., Delmestri, A. et al. Coding algorithms for defining Charlson and Elixhauser co-morbidities in Read-coded databases. BMC Med Res Methodol 19, 115 (2019). https://doi.org/10.1186/s12874-019-0753-5
Elixhauser A, Steiner C, Harris DR, et al. Comorbidity measures for use with administrative data. Med Care. 1998;36(1):8–27.
Lyons J, Akbari A, Agrawal U, et al Protocol for the development of the Wales Multimorbidity e-Cohort (WMC): data sources and methods to construct a population-based research platform to investigate multimorbidity BMJ Open 2021;11:e047101. doi: 10.1136/bmjopen-2020-047101

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Rows: 4

Code	Description	Medcode
D000.00	Iron deficiency anaemia due to chronic blood loss	27726
D000.11	Normocytic anaemia due to chronic blood loss	6816
D000.12	Iron deficiency anaemia due to blood loss	48338
D211.11	Normocytic anaemia following acute bleed	45929

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH1070/version/2343/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH1070/version/2343/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH1070', '2343', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH1070/version/2343/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH1070/version/2343/export/codes/?format=json
CSV	site_root/phenotypes/PH1070/version/2343/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH1070', '2343', api_client=client)`

Version ID	Name	Owner	Publish date
2343	Blood loss anaemia - Elixhauser primary care	coldeaa	2023-02-14	currently shown