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Pulmonary circulation disorders - Elixhauser primary care

David Metcalfe, James Masters, Antonella Delmestri, Andrew Judge, Daniel Perry, Cheryl Zogg, Belinda Gabbe, Matthew Costa

ID
PH1094
Version ID
2391
Type
Disease or Syndrome
Data Sources
Sex
♀  Female ♂  Male
Agreement Date
20/05/2019
Coding system
Read codes v2
Collections
Phenotype Library
Tags
Comorbidity Index

Definition

Pulmonary circulation disorders comorbidity category for Elixhauser index, defined in Read codes for primary care by David Metcalfe et. al.

Publications

  • Metcalfe, D., Masters, J., Delmestri, A. et al. Coding algorithms for defining Charlson and Elixhauser co-morbidities in Read-coded databases. BMC Med Res Methodol 19, 115 (2019). https://doi.org/10.1186/s12874-019-0753-5

  • Elixhauser A, Steiner C, Harris DR, et al. Comorbidity measures for use with administrative data. Med Care. 1998;36(1):8–27.

  • Lyons J, Akbari A, Agrawal U, et al Protocol for the development of the Wales Multimorbidity e-Cohort (WMC): data sources and methods to construct a population-based research platform to investigate multimorbidity BMJ Open 2021;11:e047101. doi: 10.1136/bmjopen-2020-047101

Clinical Code List

Rows: 50
Code Description Medcode
7A0B000 Pulmonary thromboendarterectomy 89238
7A6Ky00 Other specified operations on individual pulmonary veins 93482
7Q01000 Primary pulmonary hypertension drugs Band 1 55603
7Q01100 Primary pulmonary hypertension drugs Band 2 63946
7Q01200 Primary pulmonary hypertension drugs Band 3 65081
7Q01300 Primary pulmonary hypertension drugs Band 4 90875
G4...00 Pulmonary circulation diseases 7180
G4...11 Heart disease - pulmonary 22412
G40..00 Acute pulmonary heart disease 63217
G400.00 Acute cor pulmonale 8464
G401.00 Pulmonary embolism 1266
G401000 Post operative pulmonary embolus 18121
G401100 Recurrent pulmonary embolism 96209
G40z.00 Acute pulmonary heart disease NOS 65533
G41..00 Chronic pulmonary heart disease 46294
G410.00 Primary pulmonary hypertension 245
G411.00 Kyphoscoliotic heart disease 42901
G41y.00 Other chronic pulmonary heart disease 54113
G41y000 Secondary pulmonary hypertension 34065
G41y100 Thromboembolic pulmonary hypertension 102444
G41yz00 Other chronic pulmonary heart disease NOS 71046
G41z.00 Chronic pulmonary heart disease NOS 15782
G41z.11 Chronic cor pulmonale 5695
G42..00 Other pulmonary circulation disease 24549
G42..11 Pulmonary vessel disease 31883
G42y.00 Other specified pulmonary circulation disease 65954
G42yz00 Other specified pulmonary circulation disease NOS 41728
G42z.00 Other pulmonary circulation disease NOS 73599
G4y..00 Other specified pulmonary circulation disease 61138
G4z..00 Pulmonary circulation disease NOS 16084
Gyu4.00 [X]Pulmon heart disease & diseases of pulmonary circulation 95488
Gyu4100 [X]Other diseases of pulmonary vessels 106928
H54..00 Pulmonary congestion and hypostasis 30214
H541.00 Pulmonary congestion 1585
L096400 Pulmonary embolism following abortive pregnancy 67006
L43..00 Obstetric pulmonary embolism 7174
L430.00 Obstetric air pulmonary embolism 31313
L431.00 Amniotic fluid pulmonary embolism 44192
L431100 Amniotic fluid pulmonary embolism - delivered 73624
L432.00 Obstetric blood-clot pulmonary embolism 49269
L43yz00 Other obstetric pulmonary embolism NOS 109337
L43z.00 Obstetric pulmonary embolism NOS 73569
L43z000 Obstetric pulmonary embolism NOS, unspecified 101944
L43z100 Obstetric pulmonary embolism NOS - delivered 97367
L43z400 Obstetric pulmonary embolism NOS with postnatal complication 44404
L43zz00 Obstetric pulmonary embolism NOS 98639
P736.12 Pulmonary arterio-venous malformation 10047
P737.11 Dilatation of pulmonary artery 36307
SB16.00 Pulmonary blood vessel injury 101241
ZV12900 [V] Personal history of pulmonary embolism 16976

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH1094/version/2391/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1094/version/2391/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH1094', '2391', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH1094/version/2391/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH1094/version/2391/export/codes/?format=json
CSV site_root/phenotypes/PH1094/version/2391/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH1094', '2391', api_client=client)

Version History

Version
ID
Name Owner Publish date
2391 Pulmonary circulation disorders - Elixhauser primary care coldeaa 2023-02-14 currently shown

Export - export all codes into a csv file/JSON/XML for the current phenotype version.

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