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Benign neoplasm of brain and other parts of central nervous system

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

Type
Disease or Syndrome
ID
PH120
Version ID
240
Valid event data range
01/01/1999 - 01/07/2016
Sex
Female, Male
Agreement Date
2019-05-20
Coding system
Read codes v2 ICD10 codes Med codes
Tags /Collections
CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Benign neoplasm of brain and other parts of central nervous system IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

  1. Benign neoplasm of brain and other parts of central nervous system diagnosis or history of diagnosis during a consultation

OR Secondary care

  1. ALL diagnoses of Benign neoplasm of brain and other parts of central nervous system or history of diagnosis during a hospitalization

Implementation


Publications

  • Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

Rows: 43
Code Description Disease Medcode Category
B7F..00 Benign neoplasm of brain and other parts of nervous system Benign neoplasm of brain and other parts of central nervous system 27289.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F0.00 Benign neoplasm of brain Benign neoplasm of brain and other parts of central nervous system 11678.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F0.11 Cerebral tumour - benign Benign neoplasm of brain and other parts of central nervous system 31189.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F0000 Benign neoplasm of brain, supratentorial Benign neoplasm of brain and other parts of central nervous system 55419.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F1.00 Benign neoplasm of cranial nerves Benign neoplasm of brain and other parts of central nervous system 44776.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F1000 Acoustic neuroma Benign neoplasm of brain and other parts of central nervous system 6174.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F2.00 Benign neoplasm of cerebral meninges Benign neoplasm of brain and other parts of central nervous system 18200.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F2000 Cerebral meningioma Benign neoplasm of brain and other parts of central nervous system 8672.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F2z00 Benign neoplasm of cerebral meninges NOS Benign neoplasm of brain and other parts of central nervous system 65069.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F3.00 Benign neoplasm of spinal cord Benign neoplasm of brain and other parts of central nervous system 31391.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F4.00 Benign neoplasm of spinal meninges Benign neoplasm of brain and other parts of central nervous system 35095.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F4000 Spinal meningioma Benign neoplasm of brain and other parts of central nervous system 9544.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7F4z00 Benign neoplasm of spinal meninges NOS Benign neoplasm of brain and other parts of central nervous system 94426.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7FX.00 Benign neoplasm of meninges, unspecified Benign neoplasm of brain and other parts of central nervous system 37637.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7Fz.00 Benign neoplasm of brain or other nervous system NOS Benign neoplasm of brain and other parts of central nervous system 60341.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2.00 Benign neoplasm of pituitary gland and craniopharyngeal duct Benign neoplasm of brain and other parts of central nervous system 5706.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2.11 Pituitary adenoma Benign neoplasm of brain and other parts of central nervous system 2321.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2000 Benign neoplasm of pituitary gland Benign neoplasm of brain and other parts of central nervous system 20267.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2100 Benign neoplasm of Rathke's pouch Benign neoplasm of brain and other parts of central nervous system 46829.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2200 Benign neoplasm of sella turcica Benign neoplasm of brain and other parts of central nervous system 15635.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2300 Benign neoplasm of craniopharyngeal duct Benign neoplasm of brain and other parts of central nervous system 55379.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H2z00 Benign neoplasm of pituitary and craniopharyngeal duct NOS Benign neoplasm of brain and other parts of central nervous system 71886.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H3.00 Benign neoplasm of pineal gland Benign neoplasm of brain and other parts of central nervous system 50466.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H4.00 Benign neoplasm of carotid body Benign neoplasm of brain and other parts of central nervous system 39432.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H5.00 Benign neoplasm of aortic body and other paraganglia Benign neoplasm of brain and other parts of central nervous system 64587.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H5000 Benign neoplasm of glomus jugulare Benign neoplasm of brain and other parts of central nervous system 58575.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H5100 Benign neoplasm of aortic body Benign neoplasm of brain and other parts of central nervous system 37162.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H5200 Benign neoplasm of coccygeal body Benign neoplasm of brain and other parts of central nervous system 53562.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
B7H5z00 Benign neoplasm of aortic body and other paraganglia NOS Benign neoplasm of brain and other parts of central nervous system 73669.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBb5.00 [M]Choroid plexus papilloma NOS Benign neoplasm of brain and other parts of central nervous system 26157.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd..00 [M]Meningiomas Benign neoplasm of brain and other parts of central nervous system 2843.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd0.00 [M]Meningioma NOS Benign neoplasm of brain and other parts of central nervous system 12096.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd3.00 [M]Meningotheliomatous meningioma Benign neoplasm of brain and other parts of central nervous system 65426.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd3.11 [M]Endotheliomatous meningioma Benign neoplasm of brain and other parts of central nervous system 96487.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd4.00 [M]Fibrous meningioma Benign neoplasm of brain and other parts of central nervous system 38295.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd5.00 [M]Psammomatous meningioma Benign neoplasm of brain and other parts of central nervous system 38870.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd6.00 [M]Angiomatous meningioma Benign neoplasm of brain and other parts of central nervous system 46251.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd7.00 [M]Haemangioblastic meningioma Benign neoplasm of brain and other parts of central nervous system 21598.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd7.11 [M]Angioblastic meningioma Benign neoplasm of brain and other parts of central nervous system 46490.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd8.00 [M]Haemangiopericytic meningioma Benign neoplasm of brain and other parts of central nervous system 50822.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBd9.00 [M]Transitional meningioma Benign neoplasm of brain and other parts of central nervous system 67929.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBdz.00 [M]Meningioma NOS Benign neoplasm of brain and other parts of central nervous system 47848.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
BBe5.11 [M]Acoustic neuroma Benign neoplasm of brain and other parts of central nervous system 21247.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system
Rows: 43
Code Description Disease ReadcodeDescr Readcode
11678.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain B7F0.00
12096.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Meningioma NOS BBd0.00
15635.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of sella turcica B7H2200
18200.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of cerebral meninges B7F2.00
20267.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of pituitary gland B7H2000
21247.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Acoustic neuroma BBe5.11
21598.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Haemangioblastic meningioma BBd7.00
2321.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Pituitary adenoma B7H2.11
26157.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Choroid plexus papilloma NOS BBb5.00
27289.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of nervous system B7F..00
2843.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Meningiomas BBd..00
31189.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Cerebral tumour - benign B7F0.11
31391.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of spinal cord B7F3.00
35095.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of spinal meninges B7F4.00
37162.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of aortic body B7H5100
37637.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of meninges, unspecified B7FX.00
38295.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Fibrous meningioma BBd4.00
38870.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Psammomatous meningioma BBd5.00
39432.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of carotid body B7H4.00
44776.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of cranial nerves B7F1.00
46251.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Angiomatous meningioma BBd6.00
46490.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Angioblastic meningioma BBd7.11
46829.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of Rathke's pouch B7H2100
47848.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Meningioma NOS BBdz.00
50466.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of pineal gland B7H3.00
50822.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Haemangiopericytic meningioma BBd8.00
53562.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of coccygeal body B7H5200
55379.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of craniopharyngeal duct B7H2300
55419.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain, supratentorial B7F0000
5706.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of pituitary gland and craniopharyngeal duct B7H2.00
58575.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of glomus jugulare B7H5000
60341.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain or other nervous system NOS B7Fz.00
6174.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Acoustic neuroma B7F1000
64587.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of aortic body and other paraganglia B7H5.00
65069.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of cerebral meninges NOS B7F2z00
65426.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Meningotheliomatous meningioma BBd3.00
67929.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Transitional meningioma BBd9.00
71886.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of pituitary and craniopharyngeal duct NOS B7H2z00
73669.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of aortic body and other paraganglia NOS B7H5z00
8672.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Cerebral meningioma B7F2000
94426.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of spinal meninges NOS B7F4z00
9544.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Spinal meningioma B7F4000
96487.0 Diagnosis of Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system [M]Endotheliomatous meningioma BBd3.11
Rows: 7
Code Description Disease Category
D32 Benign neoplasm of meninges Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D33 Benign neoplasm of brain and other parts of central nervous system Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D35.2 Benign neoplasm: Pituitary gland Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D35.3 Benign neoplasm: Craniopharyngeal duct Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D35.4 Benign neoplasm: Pineal gland Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D35.5 Benign neoplasm: Carotid body Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system
D35.6 Benign neoplasm: Aortic body and other paraganglia Benign neoplasm of brain and other parts of central nervous system Diagnosis of Benign neoplasm of brain and other parts of central nervous system

API

To Export Phenotype Details:

Format API
XML site_root/api/v1/public/phenotypes/PH120/version/240/detail/?format=xml
JSON site_root/api/v1/public/phenotypes/PH120/version/240/detail/?format=json
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get details of phenotype

details = get_phenotype_detail_by_version('PH120', '240', api_client=client)

To Export Phenotype Code List:

Format API
XML site_root/api/v1/public/phenotypes/PH120/version/240/export/codes/?format=xml
JSON site_root/api/v1/public/phenotypes/PH120/version/240/export/codes/?format=json
CSV site_root/phenotypes/PH120/version/240/export/codes/
R Package

# Download here

library(ConceptLibraryClient)


# Connect to API

client = connect_to_API(public=TRUE)


# Get codelists of phenotype

codelists = get_phenotype_code_list('PH120', '240', api_client=client)

Version History

Version
ID
Name Owner Publish date
240 Benign neoplasm of brain and other parts of central nervous system ieuan.scanlon 2021-10-06 currently shown

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