Phenotype Library | phenotype: Benign neoplasm of ovary

Benign neoplasm of ovary

Kuan V, Denaxas S, Gonzalez-Izquierdo A, Direk K, Bhatti O, Husain S, Sutaria S, Hingorani M, Nitsch D, Parisinos C, Lumbers T, Mathur R, Sofat R, Casas JP, Wong I, Hemingway H, Hingorani A

PH122

Version ID

244

Type

Disease or Syndrome

Data Sources

CPRD GOLD , HES Admitted Patient Care data for CPRD GOLD

Valid event data range

01/01/1999 - 01/07/2016

Sex

♀ Female ♂ Male

Agreement Date

2019-05-20

Coding system

Read codes v2 ICD10 codes Med codes

Collections

CALIBER Phenotype Library

Definition

At the specified date, a patient is defined as having had Benign neoplasm of ovary IF they meet the criteria for any of the following on or before the specified date. The earliest date on which the individual meets any of the following criteria on or before the specified date is defined as the first event date:

Primary care

Benign neoplasm of ovary diagnosis or history of diagnosis during a consultation

OR Secondary care

ALL diagnoses of Benign neoplasm of ovary or history of diagnosis during a hospitalization

Implementation

PhenoFlow Implementation:

https://kclhi.org/phenoflow/phenotype/download/358

Publications

Kuan V., Denaxas S., Gonzalez-Izquierdo A. et al. A chronological map of 308 physical and mental health conditions from 4 million individuals in the National Health Service. The Lancet Digital Health - DOI 10.1016/S2589-7500(19)30012-3

Clinical Code List

CSV

JSON

XML

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C1029/3197 Benign neoplasm of ovary - Primary care - Read codes v2

Rows: 27

Code	Description	Disease	Medcode	Category
7E20300	Ovarian cystectomy	Benign neoplasm of ovary	958.0	Diagnosis of Benign neoplasm of ovary
7E23300	Open drainage of cyst of ovary	Benign neoplasm of ovary	11747.0	Diagnosis of Benign neoplasm of ovary
7E25200	Endoscopic drainage of cyst of ovary	Benign neoplasm of ovary	9380.0	Diagnosis of Benign neoplasm of ovary
7E25211	Laparoscopic drainage ovarian cyst	Benign neoplasm of ovary	6521.0	Diagnosis of Benign neoplasm of ovary
7E29100	Transvaginal drainage of ovarian cyst	Benign neoplasm of ovary	49911.0	Diagnosis of Benign neoplasm of ovary
7E2B000	Transvaginal ultrasound guided aspiration of ovarian cyst	Benign neoplasm of ovary	85236.0	Diagnosis of Benign neoplasm of ovary
B7A..00	Benign neoplasm of ovary	Benign neoplasm of ovary	18639.0	Diagnosis of Benign neoplasm of ovary
B7A..11	Dermoid cyst of ovary	Benign neoplasm of ovary	11728.0	Diagnosis of Benign neoplasm of ovary
B7A2.00	Benign teratoma of ovary	Benign neoplasm of ovary	11937.0	Diagnosis of Benign neoplasm of ovary
BB81.00	[M]Ovarian cystic, mucinous and serous neoplasms	Benign neoplasm of ovary	2979.0	Diagnosis of Benign neoplasm of ovary
BB81z00	[M]Ovarian cystic, mucinous or serous neoplasm NOS	Benign neoplasm of ovary	40033.0	Diagnosis of Benign neoplasm of ovary
K53..11	Ovarian cysts	Benign neoplasm of ovary	957.0	Diagnosis of Benign neoplasm of ovary
K530.00	Follicular cyst of ovary	Benign neoplasm of ovary	15786.0	Diagnosis of Benign neoplasm of ovary
K530.11	Graafian follicle cyst	Benign neoplasm of ovary	40974.0	Diagnosis of Benign neoplasm of ovary
K531.00	Corpus luteum cyst	Benign neoplasm of ovary	20030.0	Diagnosis of Benign neoplasm of ovary
K531000	Corpus luteum cyst unspecified	Benign neoplasm of ovary	53674.0	Diagnosis of Benign neoplasm of ovary
K531100	Corpus luteum cyst haemorrhage	Benign neoplasm of ovary	49824.0	Diagnosis of Benign neoplasm of ovary
K531200	Corpus luteum cyst rupture	Benign neoplasm of ovary	5588.0	Diagnosis of Benign neoplasm of ovary
K531z00	Corpus luteum cyst NOS	Benign neoplasm of ovary	41667.0	Diagnosis of Benign neoplasm of ovary
K532.00	Other ovarian cysts	Benign neoplasm of ovary	33932.0	Diagnosis of Benign neoplasm of ovary
K532000	Corpus albicans cyst of the ovary	Benign neoplasm of ovary	51846.0	Diagnosis of Benign neoplasm of ovary
K532100	Theca lutein cyst of the ovary	Benign neoplasm of ovary	35115.0	Diagnosis of Benign neoplasm of ovary
K532300	Simple cystoma of the ovary	Benign neoplasm of ovary	25689.0	Diagnosis of Benign neoplasm of ovary
K532z00	Ovarian cyst NOS	Benign neoplasm of ovary	6251.0	Diagnosis of Benign neoplasm of ovary
Kyu9500	[X]Other and unspecified ovarian cysts	Benign neoplasm of ovary	52995.0	Diagnosis of Benign neoplasm of ovary
PC04.00	Developmental ovarian cyst	Benign neoplasm of ovary	17505.0	Diagnosis of Benign neoplasm of ovary
ZV13G00	[V]Personal history of ovarian cyst	Benign neoplasm of ovary	105462.0	History of Benign neoplasm of ovary

C1030/3199 Benign neoplasm of ovary - Primary care - Med codes

Rows: 27

Code	Description	Disease	ReadcodeDescr	Readcode
105462.0	History of Benign neoplasm of ovary	Benign neoplasm of ovary	[V]Personal history of ovarian cyst	ZV13G00
11728.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Dermoid cyst of ovary	B7A..11
11747.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Open drainage of cyst of ovary	7E23300
11937.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Benign teratoma of ovary	B7A2.00
15786.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Follicular cyst of ovary	K530.00
17505.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Developmental ovarian cyst	PC04.00
18639.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Benign neoplasm of ovary	B7A..00
20030.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus luteum cyst	K531.00
25689.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Simple cystoma of the ovary	K532300
2979.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	[M]Ovarian cystic, mucinous and serous neoplasms	BB81.00
33932.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Other ovarian cysts	K532.00
35115.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Theca lutein cyst of the ovary	K532100
40033.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	[M]Ovarian cystic, mucinous or serous neoplasm NOS	BB81z00
40974.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Graafian follicle cyst	K530.11
41667.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus luteum cyst NOS	K531z00
49824.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus luteum cyst haemorrhage	K531100
49911.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Transvaginal drainage of ovarian cyst	7E29100
51846.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus albicans cyst of the ovary	K532000
52995.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	[X]Other and unspecified ovarian cysts	Kyu9500
53674.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus luteum cyst unspecified	K531000
5588.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Corpus luteum cyst rupture	K531200
6251.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Ovarian cyst NOS	K532z00
6521.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Laparoscopic drainage ovarian cyst	7E25211
85236.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Transvaginal ultrasound guided aspiration of ovarian cyst	7E2B000
9380.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Endoscopic drainage of cyst of ovary	7E25200
957.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Ovarian cysts	K53..11
958.0	Diagnosis of Benign neoplasm of ovary	Benign neoplasm of ovary	Ovarian cystectomy	7E20300

C1031/3201 Benign neoplasm of ovary - Secondary care - Diagnoses - ICD10 codes

Rows: 4

Code	Description	Disease	Category
D27	Benign neoplasm of ovary	Benign neoplasm of ovary	Diagnosis of Benign neoplasm of ovary
N83.0	Follicular cyst of ovary	Benign neoplasm of ovary	Diagnosis of Benign neoplasm of ovary
N83.1	Corpus luteum cyst	Benign neoplasm of ovary	Diagnosis of Benign neoplasm of ovary
N83.2	Other and unspecified ovarian cysts	Benign neoplasm of ovary	Diagnosis of Benign neoplasm of ovary

API

To Export Phenotype Details:

Format	API
XML	site_root/api/v1/public/phenotypes/PH122/version/244/detail/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH122/version/244/detail/?format=json
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get details of phenotype details = get_phenotype_detail_by_version('PH122', '244', api_client=client)`

To Export Phenotype Code List:

Format	API
XML	site_root/api/v1/public/phenotypes/PH122/version/244/export/codes/?format=xml
JSON	site_root/api/v1/public/phenotypes/PH122/version/244/export/codes/?format=json
CSV	site_root/phenotypes/PH122/version/244/export/codes/
R Package	`# Download here library(ConceptLibraryClient) # Connect to API client = connect_to_API(public=TRUE) # Get codelists of phenotype codelists = get_phenotype_code_list('PH122', '244', api_client=client)`

Version History

Version ID	Name	Owner	Publish date
244	Benign neoplasm of ovary	ieuan.scanlon	2021-10-06	currently shown