Bronchiestasis

Eleanor L Axson, Jennifer K Quint

PH13 / 26 Clinical-Coded Phenotype

  1. Overview

    Phenotype Type
    Disease or syndrome
    Sex
    Both
    Valid Event Date Range
    01/01/2001 - 31/12/2019
    Coding System
    ICD10 codesRead codes v2SNOMED CT codesUKBioBank codesICD11 codes
    Data Sources
    UK Biobank, CPRD Aurum, Death Registration data for CPRD Aurum, CPRD GOLD, Death Registration data for CPRD GOLD, HES Admitted Patient Care data for CPRD Aurum, HES Admitted Patient Care data for CPRD GOLD
    Collections
    BREATHEPhenotype Library
    Tags
    No data

  2. Definition

  3. Implementation

    Phenoflow ID
    https://kclhi.org/phenoflow/phenotype/download/49

    Implementation

    No data

  4. Clinical Code List

  5. Publication

    No publications

    Citation Example

    Eleanor L Axson, Jennifer K Quint. PH13 / 26 - Bronchiestasis. Phenotype Library [Online]. 06 October 2021. Available from: http://phenotypes.healthdatagateway.org/phenotypes/PH13/version/26/detail/. [Accessed 21 November 2024]

  6. API

    To Export Phenotype Details:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH13/version/26/detail/?format=json
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get details of phenotype

    phenotype_details = client$phenotypes$get_detail(
     'PH13',
     version_id=26
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_detail(
     'PH13',
     version_id=26
    )

    To Export Phenotype Code List:

    FormatAPI
    JSON site_root/api/v1/phenotypes/PH13/version/26/export/codes/?format=json
    CSV site_root/phenotypes/PH13/version/26/export/codes/
    R Package

    # Download here

    library(ConceptLibraryClient)


    # Connect to API

    client = ConceptLibraryClient::Connection$new(public=TRUE)


    # Get codelist of phenotype

    phenotype_codelist = client$phenotypes$get_codelist(
     'PH13',
     version_id=26
    )

    Py Package

    # Download here

    from pyconceptlibraryclient import Client


    # Connect to API

    client = Client(public=True)


    # Get codelist of phenotype

    phenotype_codelist = client.phenotypes.get_codelist(
     'PH13',
     version_id=26
    )

  7. Version History

    Version IDNameOwnerPublish date
    26 Bronchiestasis ieuan.scanlon2021-10-06currently shown